Pairwise Alignments

Query, 368 a.a., MexH family multidrug efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 366 a.a., efflux transporter periplasmic adaptor subunit from Pedobacter sp. GW460-11-11-14-LB5

 Score =  101 bits (251), Expect = 4e-26
 Identities = 82/305 (26%), Positives = 140/305 (45%), Gaps = 24/305 (7%)

Query: 68  QGVTLTTETAGVIDQITFESGTQVAKDQPLVLLDS-------AVERANLKSTEARLPAAK 120
           Q V L  + +  +  +  + G++V+K Q L+ L++       A  ++ +K+ EA   A+K
Sbjct: 65  QQVDLYAKVSSFVKTLKVDIGSEVSKGQLLMTLEAPEMTSQLAATQSRIKAQEAIYTASK 124

Query: 121 AKYER-YKGLFAKGSISKESYDEAEASYYALSADIESLKATIAR-------REIKAPFAG 172
           A Y R Y+     G+IS    D+A A   A  A +E+ KA             I+APF+G
Sbjct: 125 ANYNRLYETSKTPGTISTNDLDQAMAKKNADLAQLEAAKAAYKEVGSVQDYLTIRAPFSG 184

Query: 173 VIGIRNVFLGQYLQP---GTDI--VRLEDTSVMRLRFTVPQRDISRISLDQEVDIFVDAY 227
           +I  RNV LG Y+ P   G+D+    L+D   +RL  ++P+     +    E+   V + 
Sbjct: 185 IISARNVNLGAYVGPTGKGSDLPLFTLQDQKNLRLAVSIPEVYTGYLKAGDEISFTVKSL 244

Query: 228 PQTSFKGSISAIEPAVSVQSGLIQVQADIPNSDGKLRSGMFARANIILPKLENQVTLPQT 287
           P  +FK  +  +  A+ ++    +++ D+PN D  L  GM A  NI LP   +   + + 
Sbjct: 245 PSQTFKAKVKRLSGALDLRLRSERIEMDVPNVDKILLPGMVAEVNIPLPANASTFIISKK 304

Query: 288 AITYTLYGDNVYIVSEENGEKRVQQHVVKVGERSESIAHILEGVKPGDVVVTTGQVRLSN 347
           A+  T  G  V  V++    K      VK G  ++    I   +  GD +V      +  
Sbjct: 305 ALLDTSEGLFVLKVADNKAVK----VGVKKGRETDDQVEIFGDLTEGDKLVAEPTEEMHE 360

Query: 348 GAKVR 352
           G  ++
Sbjct: 361 GMTIK 365