Pairwise Alignments

Query, 368 a.a., MexH family multidrug efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 398 a.a., RND family efflux transporter, MFP subunit from Dechlorosoma suillum PS

 Score =  194 bits (492), Expect = 5e-54
 Identities = 115/330 (34%), Positives = 177/330 (53%), Gaps = 6/330 (1%)

Query: 35  ANRPEPEFPVTVVTANPVDWVPVIEAIGFIEPNQGVTLTTETAGVIDQITFESGTQVAKD 94
           A  P    PV    A P        A+G +  N+ V L  ETAG I  I F+ G  VAK 
Sbjct: 48  AGAPAAPLPVETALAAPQSITDEAAAVGTLRSNESVVLRPETAGRIASIGFKDGVPVAKG 107

Query: 95  QPLVLLDSAVERANLKSTEARLPAAKAKYERYKGLFAKGSISKESYDEAEASYYALSADI 154
             LV LD+A + A L+  +A    A   ++R + L AK  IS++S D   A+     A +
Sbjct: 108 TVLVALDAATQEAELQQAKANHALAVTNFKRTEELLAKKFISQQSLDTTAANLKVQEAAV 167

Query: 155 ESLKATIARREIKAPFAGVIGIRNVFLGQYLQPGTDIVRLEDTSVMRLRFTVPQRDISRI 214
              +A +A+  I+APFAGV+GIR V +G Y++ G D++ LED   ++L F +P+  +SR+
Sbjct: 168 ALAEAKLAKTRIRAPFAGVVGIREVSVGDYVKEGADLINLEDIRTLKLDFRLPELYLSRL 227

Query: 215 SLDQEVDIFVDAYPQTSFKGSISAIEPAVSVQSGLIQVQADIPNSDGKLRSGMFARANII 274
              Q V++ VDA P  +FK  + A++P V      I ++A + N + KLR GMFAR  ++
Sbjct: 228 QKGQAVEVSVDALPNQAFKAVLDAVDPLVDANGRAISLRARLDNPELKLRPGMFARVRLL 287

Query: 275 LPKLENQVTLPQTAITYTLYGDNVYIVSEENGEKRVQQHVVKVGERSESIAHILEGVKPG 334
               +  + +P+ AI        V+ + EE   K+V+   VK G R  +   IL G+  G
Sbjct: 288 FGNRDGVLMIPEQAIVSGGGKQTVFRI-EEGKAKKVE---VKTGLRRNAQVEILSGLAAG 343

Query: 335 DVVVTTGQVRLSNGAKVRIVESDATTPPAE 364
           D ++T GQ+++ +G+ V+ V  DA   PA+
Sbjct: 344 DRIITAGQLKVQDGSPVKAV--DAAPQPAQ 371