Pairwise Alignments

Query, 368 a.a., MexH family multidrug efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 404 a.a., efflux transporter, RND family, MFP subunit (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  109 bits (273), Expect = 1e-28
 Identities = 92/357 (25%), Positives = 159/357 (44%), Gaps = 39/357 (10%)

Query: 38  PEPEFPVTVVTANPVDWVPVIEAIGFIEPNQGVTLTTETAGVIDQITFESGTQVAKDQPL 97
           P P+  V      PV  V  +E  G I P + V +T    GV+    F  G+ V K  PL
Sbjct: 40  PPPKVTVAPPRVGPV--VEYMEFTGTIAPVESVDITARVTGVLRSAQFRDGSMVRKGDPL 97

Query: 98  VLLDSAVERANLKSTEARLPAAKAKYERYKGLFAK---------GSIS-----KESYDEA 143
            L++    +A L+  EA L   +A  +R +   A+         GS +     ++  D +
Sbjct: 98  FLIEPEPFQAALQRAEAELEVQRASLDRAETELARSRKLLSEKAGSEADVVRWQQQRDSS 157

Query: 144 EASYYALSADIESLKATIARREIKAPFAGVIGIRNVFLGQYLQPG--TDIVRLEDTSVMR 201
           +A     SA IE+ +  +    I APF G +  R V  G  + PG  T +  +     + 
Sbjct: 158 KAGISRASAQIETARIDLGYTRIVAPFDGQMTRRLVDPGNVVGPGAVTKLATIVRRDQVH 217

Query: 202 LRFTVPQRDISRISLDQ----------EVDIFV-----DAYPQTSFKGSISAIEPAVSVQ 246
           + F++ +RD+ R+  D+          E+ + +     DA+P     G +   +P V   
Sbjct: 218 VYFSINERDLLRLMGDKPRNGKNGTPPELPLELALADEDAFPHA---GKLEYADPTVDPS 274

Query: 247 SGLIQVQADIPNSDGKLRSGMFARANIILPKLENQVTLPQTAITYTLYGDNVYIVSEENG 306
           +G + ++   PN+ G+L  G++AR  + + + +  + +P+ A+     G  V ++   N 
Sbjct: 275 TGTLLLRGIFPNTGGRLVPGLYARIRVAMGRRDAALLVPERALGQDQSGSYVMVI---NA 331

Query: 307 EKRVQQHVVKVGERSESIAHILEGVKPGDVVVTTGQVRLSNGAKVRIVESDATTPPA 363
           +   +Q  VK+G   E    + +G++ GD VV  G  R   G+ V  V +DA  P A
Sbjct: 332 QNVAEQRPVKLGALHEGWRVVEKGLEAGDRVVVNGMQRARPGSPVDPVAADAAAPGA 388