Pairwise Alignments

Query, 368 a.a., MexH family multidrug efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 364 a.a., efflux transporter, RND family, MFP subunit from Marinobacter adhaerens HP15

 Score =  176 bits (445), Expect = 1e-48
 Identities = 112/360 (31%), Positives = 185/360 (51%), Gaps = 8/360 (2%)

Query: 2   KKWTFFMLLIAILLFGSVIGFNLFKQQKIAEYLANRPEPEFPVTVVTANPVDWVPVIEAI 61
           K+W   ++L+A+ + G+ +  N F     A+  + R  P   V  +         V+ A+
Sbjct: 3   KQWLIALVLVAVAIGGAFVYQN-FDDGTAAQ--SGRERPASAVNTMLPQMEAVRDVVNAV 59

Query: 62  GFIEPNQGVTLTTETAGVIDQITFESGTQVAKDQPLVLLDSAVERANLKSTEARLPAAKA 121
           G ++    V LTTE +G + ++  E+G +V +   L+ LD     A+L+  EA+L  A+ 
Sbjct: 60  GSLKALNAVELTTEVSGRVVELNLETGRRVGQGDVLLRLDDRQAWADLQVIEAQLADARR 119

Query: 122 KYERYKGLFAKGSISKESYDEAEASYYALSADIESLKATIARREIKAPFAGVIGIRNVFL 181
           + ER + L +  SIS+   D+   S     A  +S +  +    I+APFAGV+G+ ++ +
Sbjct: 120 QLERAQRLRSNNSISQSQVDQLRTSVDVAEAQRQSAQVRLENHRIEAPFAGVVGLSDISV 179

Query: 182 GQYLQPGTDIVRLEDTSVMRLRFTVPQRDISRISLDQEVDIFVDAYPQTSFKGSISAIEP 241
           G Y+  GT +  L+ T  M L F++P+R + ++SL QEV     AYP  +F G +  +  
Sbjct: 180 GAYITAGTSVTTLDTTDRMELGFSIPERFLGQVSLGQEVRGASPAYPDQTFSGQLVELGS 239

Query: 242 AVSVQSGLIQVQADIPNSDGKLRSGMFARANIILPKLENQVTLPQTAITYTLYGDNVYIV 301
            VS  S  + V+A I N DG LR G F  A + L +    + +P+ A+   + GD  Y+ 
Sbjct: 240 RVSELSRSLPVRALIDNPDGLLRPGQFMSATLTL-RQRQALVIPEQAV--MIRGDEQYVF 296

Query: 302 SEENGEKRVQQHVVKVGERSESIAHILEGVKPGDVVVTTGQVRLSNGAKVRIVESDATTP 361
             E+G  R  +  V +G R      +  G+   D V+ TGQ RLS+G +VR++E D   P
Sbjct: 297 VAEDGVAR--RVSVSLGSRMPGFVEVSSGLSQEDPVIVTGQDRLSSGDRVRVLEDDKAIP 354