Pairwise Alignments

Query, 368 a.a., MexH family multidrug efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 402 a.a., Multidrug resistance protein MdtA from Enterobacter sp. TBS_079

 Score =  112 bits (280), Expect = 2e-29
 Identities = 91/335 (27%), Positives = 154/335 (45%), Gaps = 25/335 (7%)

Query: 43  PVTVVTANPVDWVPVIEAIGFIEPNQGVTLTTETAGVIDQITFESGTQVAKDQPLVLLDS 102
           PV   TA        +  +G I     VT+ +   G +  + F+ G QV     L  +D 
Sbjct: 59  PVQAATAVNKAVPRYLSGLGTITAANTVTVRSRVDGQLMALHFQEGQQVKAGDLLAEIDP 118

Query: 103 -------AVERANLKSTEARLPAAKAKYERYKGLFAKGSISKESYD-------EAEASYY 148
                  A  +  L   +A L  A+    RY+ L     +S++  D       EA  +  
Sbjct: 119 SQFKVTLAQAQGQLAKDKATLANARRDLARYQQLVKTNLVSRQELDTQQSLVSEALGTLK 178

Query: 149 ALSADIESLKATIARREIKAPFAGVIGIRNVFLGQYLQPG--TDIVRLEDTSVMRLRFTV 206
           A  A + S +  +    I AP  G +G++ V +G  +  G  T IV +  T  + L FT+
Sbjct: 179 ADEAAVASAQLQLDWSRITAPIDGRVGLKQVDIGNQISSGDTTGIVVITQTHPVDLVFTL 238

Query: 207 PQRDISRISLDQEVD--IFVDAYPQTS----FKGSISAIEPAVSVQSGLIQVQADIPNSD 260
           P+ DI+ +   Q+    + V+A+ +T+     +G++ +++  +   +G I+++A   N D
Sbjct: 239 PESDIATVVQAQKAGKGLVVEAWDRTNKQKLSEGTLLSLDNQIDTTTGTIKLKARFNNQD 298

Query: 261 GKLRSGMFARANIILPKLENQVTLPQTAITYTLYGDNVYIVSEENGEKRVQQHVVKVGER 320
             L    F  A +++   EN V +P  A+     G+ V++++ EN    V +H+VK G +
Sbjct: 299 DALFPNQFVNARMLVATQENAVVIPTAALQMGNEGNFVWVLNSENN---VSKHLVKTGIQ 355

Query: 321 SESIAHILEGVKPGDVVVTTGQVRLSNGAKVRIVE 355
                 I  G+  GD VVT G  RL+ GAKV +VE
Sbjct: 356 DSQTVVISAGLSAGDRVVTDGIDRLTEGAKVEVVE 390