Pairwise Alignments

Query, 368 a.a., MexH family multidrug efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 371 a.a., periplasmic multidrug efflux lipoprotein precursor from Caulobacter crescentus NA1000

 Score =  163 bits (413), Expect = 6e-45
 Identities = 106/348 (30%), Positives = 181/348 (52%), Gaps = 5/348 (1%)

Query: 6   FFML--LIAILLFGSVIGFNLFKQQKIAEYLANRPEPEFPVTVVTANPVDWVPVIEAIGF 63
           FF++  L A++L   V GF L   +K               TVV   P  +   IE +G 
Sbjct: 6   FFLVVALAAVVLMLGVGGFKLAFAKKEITGGGGGRATSVTQTVVAERP--FTDRIEVLGA 63

Query: 64  IEPNQGVTLTTETAGVIDQITFESGTQVAKDQPLVLLDSAVERANLKSTEARLPAAKAKY 123
            +  Q VT+T+ TA +I  + F  G  V++ Q LV L +  E A +    ARL  A+  Y
Sbjct: 64  AKGLQSVTITSNTAELITAVRFTDGQAVSRGQVLVELKAEAEDAGIAEARARLAQAERDY 123

Query: 124 ERYKGLFAKGSISKESYDEAEASYYALSADIESLKATIARREIKAPFAGVIGIRNVFLGQ 183
           +R+K L  +G   + + +++ A+Y    A ++S +A    R I+APFAG +GI +V  G 
Sbjct: 124 KRWKTLADQGIAPRATAEQSLAAYETAKAVVDSARANKLDRVIRAPFAGRVGISDVAPGM 183

Query: 184 YLQPGTDIVRLEDTSVMRLRFTVPQRDISRISLDQEVDIFVDAYPQTSFKGSISAIEPAV 243
            + PGT IV L+DTSV+R+ F+VP R +  + +   ++   DA P  +F+G I+ ++  +
Sbjct: 184 LISPGTAIVTLDDTSVIRVDFSVPDRYLETLRIGLPINAQPDALPGETFRGRIAQLDTRI 243

Query: 244 SVQSGLIQVQADIPNSDGKLRSGMFARANIILPKLENQVTLPQTAITYTLYGDNVYIVSE 303
              +  I+ +A+ PN++G+L+ GM  +   I   +   V +P+ A+ +     +VY++++
Sbjct: 244 DTTTRAIKARAEFPNANGRLKPGMLVKV-AIDKGVRTGVAVPEAAVQFEGEQASVYVITK 302

Query: 304 ENGEKRVQQHVVKVGERSESIAHILEGVKPGDVVVTTGQVRLSNGAKV 351
                  ++  V  G   +S   I  G+K GD +V  G  R+ +GA +
Sbjct: 303 GPKGMIARRTDVTTGITQDSFVEIRSGLKKGDKIVADGLNRIQDGAAI 350