Pairwise Alignments

Query, 368 a.a., MexH family multidrug efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 411 a.a., acriflavine resistance protein A precursor (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  112 bits (281), Expect = 1e-29
 Identities = 94/361 (26%), Positives = 167/361 (46%), Gaps = 39/361 (10%)

Query: 33  YLANRPE---PEFPVTVVTANPVDWVPVI-EAIGFIEPNQGVTLTTETAGVIDQITFESG 88
           ++  RP+   PE P  +V     D V +  E +G I   Q V +     G ++ + F  G
Sbjct: 32  WILTRPQKAAPEMPTVIVEPVIKDDVEIFGEYVGRIRAQQFVEVRARVEGYLENMLFAEG 91

Query: 89  TQVAKDQPLVLLD-------SAVERANLKSTEARLPAAKAKYERYKGLFAKGSISKESYD 141
           T V K+Q L +++       +   RA LK  EA+   A+   +R + L+ + + S+   D
Sbjct: 92  TYVNKNQVLFVINQDQYRAKADKARAQLKKDEAQALKAERDLKRIRPLYEQNAASQLDLD 151

Query: 142 EAEASYYALSADIESLKATIARRE-------IKAPFAGVIGIRNVFLGQYLQPG------ 188
            AEA+Y +  A +   +A +A+ E       +++P AG I  RNV LG  + PG      
Sbjct: 152 NAEAAYESAVATVAMSEADLAQAELELGYTIVRSPLAGHISERNVDLGTLVGPGGKSLLA 211

Query: 189 ------TDIVRLEDTSVMRLR-----FTVPQRDISRISLDQEVDIFVDAYPQTSFKGSIS 237
                 T +V    T++  L+       + Q+D +R S    + I +       +KG + 
Sbjct: 212 TVVKSDTVLVDFSMTALDYLKSKERNINLGQQDSTR-SWQPNITITLADNTVYPYKGYVD 270

Query: 238 AIEPAVSVQSGLIQVQADIPNSDGKLRSGMFARANIILPKLENQVTLPQTAITYTLYGDN 297
             EP V  Q+G   V+A++PN    L  G F +  ++L   E  + +P  A+T    G  
Sbjct: 271 FAEPQVDPQTGTFSVRAEMPNPKQVLLPGQFTKVKLLLDVREGAILVPMKAVTIEKGGAY 330

Query: 298 VYIVSEENGEKRVQQHVVKVGERSESIAHILEGVKPGDVVVTTGQVRLSNGAKVRIVESD 357
           +Y + +++    V++  +++G    +   +  G+  G+ +V  G  +L+ G KVRI + +
Sbjct: 331 IYTMRKDD---TVEKRFIELGPEVGNNVVVERGLAVGETIVVEGFHKLTPGMKVRISQPE 387

Query: 358 A 358
           A
Sbjct: 388 A 388