Pairwise Alignments

Query, 368 a.a., MexH family multidrug efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 372 a.a., RND family efflux transporter MFP subunit (RefSeq) from Shewanella sp. ANA-3

 Score =  415 bits (1066), Expect = e-120
 Identities = 213/372 (57%), Positives = 279/372 (75%), Gaps = 4/372 (1%)

Query: 1   MKKWTFFMLLIAILLFGSVIGFNLFKQQKIAEYLANRPEPEFPVTVVTANPVDWVPVIEA 60
           MKKWT  ML IA+L FGSVIGFNL  + KIAE +AN PE EFPVT +T +   W P I+A
Sbjct: 1   MKKWTLSMLAIAVLAFGSVIGFNLMVKSKIAEAIANMPEAEFPVTAMTLDMQKWQPTIDA 60

Query: 61  IGFIEPNQGVTLTTETAGVIDQITFESGTQVAKDQPLVLLDSAVERANLKSTEARLPAAK 120
           IGF+EP+QGVT++ E AG +  I FE+G++V K Q L  LD+ VERANLKS   +LPAA+
Sbjct: 61  IGFVEPHQGVTISNELAGRVTSINFENGSRVEKGQLLAELDAKVERANLKSKMVQLPAAE 120

Query: 121 AKYERYKGLFAKGSISKESYDEAEASYYALSADIESLKATIARREIKAPFAGVIGIRNVF 180
           A ++R   L+A+ S+SK+  D +E+ Y AL ADIESLKATI RREI APF+G++GIRN+ 
Sbjct: 121 ADFKRLSKLYAQKSVSKQDLDNSESKYLALQADIESLKATIERREISAPFSGLVGIRNIN 180

Query: 181 LGQYLQPGTDIVRLEDTSVMRLRFTVPQRDISRISLDQEVDIFVDAYPQTSFKGSISAIE 240
           LG+YLQPGTDIVRLED S M++RFT+PQ  + RI++ Q++ +FVD+YP+  F+G I+AIE
Sbjct: 181 LGEYLQPGTDIVRLEDISTMKIRFTIPQTQLPRIAVGQKIHVFVDSYPEQPFEGEIAAIE 240

Query: 241 PAVSVQSGLIQVQADIPNSDGKLRSGMFARANIILPKLENQVTLPQTAITYTLYGDNVYI 300
           PAV  QSGLIQVQA IPN + KLRSGMFAR +I+LP+L+NQ  LPQTAI +TLYG+++Y+
Sbjct: 241 PAVFYQSGLIQVQARIPNDNAKLRSGMFARVSILLPELDNQFVLPQTAINFTLYGNSIYL 300

Query: 301 VS--EENGEK--RVQQHVVKVGERSESIAHILEGVKPGDVVVTTGQVRLSNGAKVRIVES 356
           +   EENG+K  RV+Q  + V ER+ + A +   +K GD +VT+GQ+RLSN +KV +VE 
Sbjct: 301 IKEVEENGKKLARVEQINLTVLERNGNNALVSGALKAGDRIVTSGQIRLSNNSKVTVVED 360

Query: 357 DATTPPAETPML 368
            A T     P L
Sbjct: 361 QALTHSDTMPKL 372