Pairwise Alignments

Query, 1036 a.a., multidrug resistance protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1056 a.a., Hydrophobe/amphiphile efflux-1 HAE1 from Synechococcus elongatus PCC 7942

 Score =  540 bits (1390), Expect = e-157
 Identities = 332/1031 (32%), Positives = 542/1031 (52%), Gaps = 28/1031 (2%)

Query: 1    MRFTDVFIKRPVLAVSISFLIVLLGLQAIFKMQVREYPEMTNTVITVSTGYYGASADLIQ 60
            +   ++FIKRPVL    S LI L GL  +  + + + P++    I VS  Y GA A+ ++
Sbjct: 3    LSIANIFIKRPVLTTVCSILITLGGLVCLPILPIEQLPDIAPPQIQVSATYVGADAETVE 62

Query: 61   GFITQPLEQAVAQADNIDFMTSQSVLGRSTITVTMKLNTDPNAALSDVLAKTNSVRSQLP 120
              +T  LE  +   + ++++TS S +G+S+I V       P+ A  DV    +    QLP
Sbjct: 63   NTVTSILENQINGVEGMEYITSTSAIGQSSIQVYFDPTRSPDLAQVDVNNLVSVAIPQLP 122

Query: 121  KEAEDPTVTMSTGSTTAVLYIGFTS--NELASSQITDYLERVVNPQLYAVNGVSSIDLYG 178
            +  +   + ++  S + + +  F+S   E  +  I++YL   V P L  V GV   +L+G
Sbjct: 123  QAVQQQGIAVTQSSPSILQFYTFSSPTGEFDAQFISNYLSLYVQPALARVKGVGQANLFG 182

Query: 179  GMKYALRVWLDPAKMAALNLSAADVMSILNANNYQSATGQAIGEFV--------LYNGSA 230
             ++Y++R+WLDP ++A+  L+A DV S L + N     GQ  G  V        +     
Sbjct: 183  NLEYSMRLWLDPNRLASYGLTAEDVASALQSQNQIIPVGQVGGPPVNSDQAYTFILRLQG 242

Query: 231  DTQVSTVEDLESLVVKA-EKGTVTRLGDIAKVTLAKSHDTYRASANGREAVVAAINAAPS 289
              Q+STVE   ++V+K  E GT+ R+ D+ +        +   +A+GR  V   I   P 
Sbjct: 243  QGQLSTVEQFNNVVLKTGEDGTLVRVKDVGRAEEGAQSYSVTLAADGRPGVGLGIYQLPG 302

Query: 290  ANPINIAKDVLEMLPELQKNMPSNIEMNVLYDSTVAINESIHEVIKTIVEAALIVLVVIT 349
            +N I++A  + E L  L++  P  +E  +++D T  +N S+ EV+ T+V+A  +V++VI 
Sbjct: 303  SNAIDVANGIREQLAILEQQFPPGLEGKLVFDVTDFVNASLSEVLITLVQAIALVILVIF 362

Query: 350  LFLGSLRAVLIPIVTIPLSLIGVAMVMQMMGFSWNLMTLLAMVLAIGLVVDDAIVVLENV 409
            +FL   R  LIP + IP+SL+G    +Q  GFS NL+TL  +VLA GLVVDDAIVV+E +
Sbjct: 363  IFLQDWRTTLIPAIAIPVSLVGTLAFIQAFGFSINLLTLFGLVLATGLVVDDAIVVVEAI 422

Query: 410  DRHIKEGESPFRAAIIGTREIAIPVIAMTLTLGAVYAPIALMGGITGSLFKEFALTLAGS 469
               I+EG++P +A+I     +   VIA ++ L AV+ P+A   G TG ++++FALTL  +
Sbjct: 423  TEKIEEGKTPLQASIEAMDILFGAVIATSVVLFAVFIPVAFFPGATGRIYQQFALTLTFT 482

Query: 470  VFVSGIVALTLSPMMCSKMLKANEAPNKFELKVHHL----LDRMTARYERMLTAVMAHRP 525
            + +S   ALT SP M + +L+  +    +  K  +L     DR+   Y + L  +   + 
Sbjct: 483  ILISTFNALTFSPAMSALLLRPAKQQQGWLGKFFNLFNAGFDRVRIGYSKALAIIDRLKF 542

Query: 526  VVIAFAFIVFASLPMLFKFIPSELAPSEDKGVIMLMGTGPSNANLDYLANTMDDVNKILS 585
            +VI       A    LF   P+   P+ED+G  + +  GP  A L+Y       +  IL 
Sbjct: 543  LVIGLFAAGLALTGWLFTTTPTGFVPTEDQGYFLGLIIGPEGAPLNYTQKVGQKIQSILE 602

Query: 586  DQPEVQFAQVFTGV----PNSNQAFGIASMVPWSQREASQATVTNRVG----TLVQDIPG 637
             +P V    V +G       +N     AS+ PW +R+A+  +    VG     L + I  
Sbjct: 603  TEPSVTSTAVISGFSFIGQGNNLGIYFASLKPWDERKAADQSAEAIVGRINQKLFEGISE 662

Query: 638  MAVTAFQMPELPGAGSGLPIQFVITTPS----NFESLFTIATDVLTEVKANPMFVYSDLD 693
              V     P +PG  +   +QF+IT  +    +          ++   + NP+   +   
Sbjct: 663  AQVRTVLPPAIPGFAAYGGVQFLITDQTGGALSVSQFLESVNKIIGLARENPITRQTFTP 722

Query: 694  LNFDSATMKINIDKDKAGAYGVTMQDIGITLSTMMADGYVNRIDLNGRSYEVIPQVERKW 753
               +S  ++I++D+D+  A  +   +   TL + M   YVN+I   GRSY+V  Q +  +
Sbjct: 723  FTANSPQIEIDVDRDRLAALNIDFGEALQTLGSYMGGQYVNQITQFGRSYQVYIQADNGF 782

Query: 754  RLNPESMNSYYVRAADGKVIPLGSLVTIDVVAEPRSLPHFNQLNSATVGAVPAPGTAMGD 813
            R  P+++   YV++ DG  +PL   +TI     P  + H+N   S  V +  APGT+ G 
Sbjct: 783  RATPQALTQIYVKSRDGATVPLSEFLTIRQQVGPLYITHYNLFRSIEVDSFAAPGTSTGQ 842

Query: 814  AINWFENLASSKLPKGYSHDYMGEARQYVTEGSALYATFGLALAIIFLVLAIQFESLRDP 873
             I   ++       + + +  +G AR+ V+ G+     FGL + ++FLVLA  +ES  DP
Sbjct: 843  VIEGLKDAFQKANFQRFGNGLVGLAREEVSAGTLAPLIFGLGVVVVFLVLAALYESYVDP 902

Query: 874  LVIMVSVPLAICGALIALAWGTATMNIYSQVGLITLVGLITKHGILICEVAKEEQLHNKL 933
            L+I+++VPLAI GAL+ L      +++Y+QVGL+ L+GL +K+ ILI + A  E +   +
Sbjct: 903  LIILLTVPLAILGALVFLNLRGIPLDVYAQVGLVMLIGLASKNAILIVDYA-NEAVAKGM 961

Query: 934  SRIEAVMHAAKVRLRPILMTTAAMIAGLIPLMYATGAGAAQRFSIGIVIVSGLAIGTLFT 993
               EA + AAK+R RPI+MT  + + G  PL+ A GAGAA R+S+G V+  GL + T+ +
Sbjct: 962  GYTEAALEAAKLRFRPIVMTAISSLIGFFPLVIAQGAGAASRWSLGTVVFGGLLVATVLS 1021

Query: 994  LFVLPVIYSYL 1004
            L ++P  Y  L
Sbjct: 1022 LLIVPANYVIL 1032