Pairwise Alignments

Query, 1036 a.a., multidrug resistance protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1044 a.a., transport transmembrane protein from Sinorhizobium meliloti 1021

 Score =  538 bits (1385), Expect = e-156
 Identities = 336/1017 (33%), Positives = 548/1017 (53%), Gaps = 21/1017 (2%)

Query: 3    FTDVFIKRPVLAVSISFLIVLLGLQAIFKMQVREYPEMTNTVITVSTGYYGASADLIQGF 62
            FT +FI+RP+ A+ ++ LIV+ GL A   +++RE P++   V++V+T + GAS + I   
Sbjct: 20   FTALFIRRPIFALVVNTLIVVAGLAAWNGVEIRELPQVDQPVVSVTTEFDGASPETIDRE 79

Query: 63   ITQPLEQAVAQADNIDFMTSQSVLGRSTITVTMKLNTDPNAALSDVLAKTNSVRSQLPKE 122
            +T  +E AV++   I  ++S S  GRS +T+     TD   A +DV      +  QLP +
Sbjct: 80   VTSVIEGAVSRVQGIKGISSSSSFGRSRVTLEFSDTTDIGQAANDVRDALGRITGQLPDD 139

Query: 123  AEDPTVTMSTGSTTAVLYIGFTSNELASSQITDYLERVVNPQLYAVNGVSSIDLYGGMKY 182
            A++P +  +   +  ++ +  TS+ ++   +T  +E  ++ +L AV GV+ + +YG  + 
Sbjct: 140  ADEPRIVKADSDSQPIMRLALTSDTMSMDDMTLLVENEISDRLAAVEGVADVTVYGDQEK 199

Query: 183  ALRVWLDPAKMAALNLSAADVMSILNANNYQSATGQAIGEFVLYNGSADTQVSTVEDLES 242
              R+ L+ AK+A   ++ A++   L+  +Y    G         +  A   + T E  E+
Sbjct: 200  IFRIDLNQAKLAGRGVTVANLREALSDASYDVPAGSLTSASQDISVRATADLQTPEQFEN 259

Query: 243  LVVKAEKGTVTRLGDIAKVTLAKSHDTYRASANGREAVVAAINAAPSANPINIAKDVLEM 302
            L++    G   RL D+A VTL     T    +NGRE +   I     +N ++I++ V  +
Sbjct: 260  LML----GNNVRLRDVATVTLGPDTGTSALRSNGREGIGLGIIRQAQSNTVDISEGVRSV 315

Query: 303  LPELQKN-MPSNIEMNVLYDSTVAINESIHEVIKTIVEAALIVLVVITLFLGSLRAVLIP 361
            +  +  + +P+  E+ +  D  V IN +IHEV   +  A  IV +VI LFL   RA LIP
Sbjct: 316  VDAISSDILPTGTELKITSDDAVFINGAIHEVEIALFVAVFIVTLVIYLFLLDWRATLIP 375

Query: 362  IVTIPLSLIGVAMVMQMMGFSWNLMTLLAMVLAIGLVVDDAIVVLENVDRHIKEGESPFR 421
             +T+P++LIG    + + GFS N++TLLA+VLA GLVVDDAIVVLEN+ R   EG  P  
Sbjct: 376  TITMPIALIGTVAAIYLAGFSINILTLLAIVLATGLVVDDAIVVLENIVRRRAEGLGPRA 435

Query: 422  AAIIGTREIAIPVIAMTLTLGAVYAPIALMGGITGSLFKEFALTLAGSVFVSGIVALTLS 481
            AA+ GT E+   V+A T TL AV+ P++ + G TG LF+EF   LA S+ +S  V+LTL 
Sbjct: 436  AAVHGTLEVFFAVLATTATLAAVFVPLSFLPGQTGGLFREFGFVLAFSILLSSFVSLTLC 495

Query: 482  PMMCSKMLKANEAPNKFELKVHHLLDRMTARYERMLTAVMAHRPVVIAFAFIVFASLPML 541
            PM+ S+ML   + P++ +  +     R +A Y   L A +    +V A A    A+  + 
Sbjct: 496  PMLASRML--TKEPHEHDGVMQRFGRRASAFYRVTLRACLNAPLIVFAVAAFFTAAGALG 553

Query: 542  FKFIPSELAPSEDKGVIMLMGTGPSNANLDYLANTMDDVNKILSDQPEVQFAQV-----F 596
            F  + SEL P+ED+  +ML    P   +L+Y    +  + + L  QP ++  ++      
Sbjct: 554  FLTLKSELTPNEDRSQVMLRINAPQGVSLEYTQAQLRRIEEGL--QPLLKSGEISNVFSI 611

Query: 597  TGVPNS-NQAFGIASMVPWSQREASQATVTNRVGTLVQDIPGMAVTAFQMPEL--PGAGS 653
            +G   S N  F + ++ PW +RE +Q  +   +      IP +     Q   L   GAGS
Sbjct: 612  SGQGGSANSGFMVLTLAPWEERERTQGQIVADINRATSKIPSVRAFTIQANSLGIRGAGS 671

Query: 654  GLPIQFVITTPSNFESLFTIATDVLTEVKANPMFVYSDLDLNFDSATMKINIDKDKAGAY 713
            GL +  V    +++  L   A  ++  ++    F    L+   + A + + ID+++A   
Sbjct: 672  GLQVALV---GNDYTKLGDAAAKLVRAMEDTGRFENVRLNYEANQAQLSVTIDRERASDL 728

Query: 714  GVTMQDIGITLSTMMADGYVNRIDLNGRSYEVIPQVERKWRLNPESMNSYYVRAADGKVI 773
            GV +  +   L  M+    V  I + G +Y V      +   +P  + + +V+A DG+++
Sbjct: 729  GVDIGGLSWALQAMLDGSSVVDIFVEGEAYPVKLLSSTEPLNDPTDLQNIFVKAGDGRIV 788

Query: 774  PLGSLVTIDVVAEPRSLPHFNQLNSATVGAVPAPGTAMGDAINWFENLASSKLPKGYSHD 833
            P+ S+ T++  A    L   +QL + ++ A      A+G+A++  E +A   LP G    
Sbjct: 789  PMSSIATVEEKAVAPQLSRESQLRAVSLSAGLKSDLALGEALSMVEEMAEPLLPPGSRVM 848

Query: 834  YMGEARQYVTEGSALYATFGLALAIIFLVLAIQFESLRDPLVIMVSVPLAICGALIALAW 893
             + EA       + L+ TFG AL IIFLVLA QFES    L+IM +VPL +  A+ A+  
Sbjct: 849  PLAEAATLDENANGLFVTFGFALVIIFLVLAAQFESFVSGLIIMSTVPLGLACAVFAMIV 908

Query: 894  GTATMNIYSQVGLITLVGLITKHGILICEVAKEEQLHNKLSRIEAVMHAAKVRLRPILMT 953
               T+NIYSQ+GL+ LVG++ K+GILI E A + +   +  R  A+ +AA +RLRP++MT
Sbjct: 909  TGNTLNIYSQIGLVMLVGIMAKNGILIVEFANQLRDRGQDVR-SAIENAANIRLRPVMMT 967

Query: 954  TAAMIAGLIPLMYATGAGAAQRFSIGIVIVSGLAIGTLFTLFVLPVIYSYLAEKHKP 1010
              A + G +PL+ A+GAGA  R ++G V+V GL +  + TL++ PV Y  +A   KP
Sbjct: 968  MIATVVGAVPLVLASGAGAEARIALGWVLVGGLGLAVVVTLYLTPVAYLVIARFTKP 1024