Pairwise Alignments

Query, 1036 a.a., multidrug resistance protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1023 a.a., putative multidrug resistance protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 1436 bits (3717), Expect = 0.0
 Identities = 722/1020 (70%), Positives = 874/1020 (85%), Gaps = 4/1020 (0%)

Query: 1    MRFTDVFIKRPVLAVSISFLIVLLGLQAIFKMQVREYPEMTNTVITVSTGYYGASADLIQ 60
            MRFTD+FIKRPVLAVSISFLI+LLGL A+  MQVREYPEMTNTV+ V+T YYGA A+LIQ
Sbjct: 1    MRFTDIFIKRPVLAVSISFLILLLGLNALKSMQVREYPEMTNTVVNVATSYYGADANLIQ 60

Query: 61   GFITQPLEQAVAQADNIDFMTSQSVLGRSTITVTMKLNTDPNAALSDVLAKTNSVRSQLP 120
            GFITQPLEQA+AQADN+DFMTS+S LG+S I V MKLNTDPN AL+D+LAK NSVRSQLP
Sbjct: 61   GFITQPLEQALAQADNVDFMTSESFLGKSNINVYMKLNTDPNGALADILAKVNSVRSQLP 120

Query: 121  KEAEDPTVTMSTGSTTAVLYIGFTSNELASSQITDYLERVVNPQLYAVNGVSSIDLYGGM 180
            KE+EDPTVTMSTGS T+VLYI F+S+ + SSQ+TDYLERVV PQL+ +NGV+ ++LYGG+
Sbjct: 121  KESEDPTVTMSTGSQTSVLYIAFSSDSINSSQLTDYLERVVKPQLFTINGVAKVNLYGGI 180

Query: 181  KYALRVWLDPAKMAALNLSAADVMSILNANNYQSATGQAIGEFVLYNGSADTQVSTVEDL 240
            +Y++R+WLDPA+M A NLSA +VM +L ANN+QSA GQA G + L+NG+ADTQV+T+++L
Sbjct: 181  QYSMRIWLDPARMGAFNLSATEVMQVLQANNFQSAVGQANGVYTLFNGTADTQVATIDEL 240

Query: 241  ESLVVKAEKGTVTRLGDIAKVTLAKSHDTYRASANGREAVVAAINAAPSANPINIAKDVL 300
            + LV+K+  G V RLGDIA+V+L KSHD YRA A+G+EAVV  ++  P+ANP+ +A D  
Sbjct: 241  KRLVIKSGDGKVVRLGDIAEVSLDKSHDVYRALADGQEAVVIGLDVTPTANPLTVAADAR 300

Query: 301  EMLPELQKNMPSNIEMNVLYDSTVAINESIHEVIKTIVEAALIVLVVITLFLGSLRAVLI 360
             +LPE+++++P +I+  +LYDS+ AI+ESI+EVIKTI EAA+IV+VVITLFLGSLRAVLI
Sbjct: 301  TLLPEIERSLPPSIKARILYDSSRAIDESINEVIKTIGEAAIIVIVVITLFLGSLRAVLI 360

Query: 361  PIVTIPLSLIGVAMVMQMMGFSWNLMTLLAMVLAIGLVVDDAIVVLENVDRHIKEGESPF 420
            PIVTIPLSLIGVA++MQ  GFS NLMTLLAMVLAIGLVVDDAIVV+ENVDRHIK GESPF
Sbjct: 361  PIVTIPLSLIGVAIIMQTFGFSLNLMTLLAMVLAIGLVVDDAIVVVENVDRHIKLGESPF 420

Query: 421  RAAIIGTREIAIPVIAMTLTLGAVYAPIALMGGITGSLFKEFALTLAGSVFVSGIVALTL 480
            RAAIIGTREIA+PVI+MT+TL AVYAPIALMGGITGSLFKEFALTLAG+VF+SGIVALTL
Sbjct: 421  RAAIIGTREIAVPVISMTITLAAVYAPIALMGGITGSLFKEFALTLAGAVFISGIVALTL 480

Query: 481  SPMMCSKMLKANEAPNKFELKVHHLLDRMTARYERMLTAVMAHRPVVIAFAFIVFASLPM 540
            SPMMCSK+LK + AP+KFE  V   L RMT  Y RML AVM  R VV+AFA IVFASLP+
Sbjct: 481  SPMMCSKILKEHSAPSKFEHAVESTLSRMTDSYSRMLAAVMQKRAVVVAFAIIVFASLPL 540

Query: 541  LFKFIPSELAPSEDKGVIMLMGTGPSNANLDYLANTMDDVNKILSDQPEVQFAQVFTGVP 600
            LFKFIP+ELAP EDKGV+M+MGT PS ANLDY+   M  V  +++ QPE   +  F G+P
Sbjct: 541  LFKFIPAELAPKEDKGVVMMMGTAPSTANLDYIQANMTLVTNMIAAQPESAASLAFVGIP 600

Query: 601  NSNQAFGIASMVPWSQREASQATVTNRVGTLVQDIPGMAVTAFQMPELPGAGSGLPIQFV 660
            N+NQAFGIA +VPWS+R+ SQ  +       V+ IPGMAVT F+MPELPGA +GLPIQFV
Sbjct: 601  NANQAFGIAPLVPWSERDKSQKEMQKFFAGEVKSIPGMAVTTFEMPELPGASNGLPIQFV 660

Query: 661  ITTPSNFESLFTIATDVLTEVKANPMFVYSDLDLNFDSATMKINIDKDKAGAYGVTMQDI 720
            +TT S+FESLF I T VL +V+ +P F+YS+++L FDS +M+I+I +D AG YGVTMQDI
Sbjct: 661  VTTASSFESLFQIGTQVLEKVQKSPYFIYSEMNLKFDSGSMRIHIKRDLAGTYGVTMQDI 720

Query: 721  GITLSTMMADGYVNRIDLNGRSYEVIPQVERKWRLNPESMNSYYVRAADGKVIPLGSLVT 780
            G+TLSTMM+DGYVNRI+L+GRSYEVIPQVERK R NPES+ +YYV+AADG  IPL SLV 
Sbjct: 721  GMTLSTMMSDGYVNRINLDGRSYEVIPQVERKLRANPESLANYYVKAADGNSIPLSSLVE 780

Query: 781  IDVVAEPRSLPHFNQLNSATVGAVPAPGTAMGDAINWFENLASSKLPKGYSHDYMGEARQ 840
            I++VA+PRSLPHFNQ+NS T+G V  PG A+GDAI + +++  ++LPKGY++D++GEARQ
Sbjct: 781  IEMVAQPRSLPHFNQMNSLTIGGVATPGVAIGDAIAFLKDIGDNQLPKGYNYDFLGEARQ 840

Query: 841  YVTEGSALYATFGLALAIIFLVLAIQFESLRDPLVIMVSVPLAICGALIALAW----GTA 896
            +VTEGSALY+TF LA+AIIFLVLA QFESL+DP+VI+VSVPLAICGALIAL W    G +
Sbjct: 841  FVTEGSALYSTFLLAIAIIFLVLASQFESLKDPVVILVSVPLAICGALIALGWTHVFGLS 900

Query: 897  TMNIYSQVGLITLVGLITKHGILICEVAKEEQLHNKLSRIEAVMHAAKVRLRPILMTTAA 956
            +MNIY+QVGLITLVGLITKHGIL+CEVAKEEQLH  +SRIEA+  AAK+RLRPILMTTAA
Sbjct: 901  SMNIYTQVGLITLVGLITKHGILMCEVAKEEQLHRGISRIEAISLAAKIRLRPILMTTAA 960

Query: 957  MIAGLIPLMYATGAGAAQRFSIGIVIVSGLAIGTLFTLFVLPVIYSYLAEKHKPLPVFVE 1016
            MIAGLIPL++A+GAGA  RF+IG+VIV+GLAIGT+FTLFVLPVIYS+L EKHKPLP FVE
Sbjct: 961  MIAGLIPLLFASGAGAVARFNIGLVIVAGLAIGTVFTLFVLPVIYSFLGEKHKPLPEFVE 1020