Pairwise Alignments

Query, 1036 a.a., multidrug resistance protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1029 a.a., Acriflavin resistance protein (NCBI) from Rhodospirillum rubrum S1H

 Score = 1020 bits (2637), Expect = 0.0
 Identities = 516/1007 (51%), Positives = 716/1007 (71%), Gaps = 2/1007 (0%)

Query: 1    MRFTDVFIKRPVLAVSISFLIVLLGLQAIFKMQVREYPEMTNTVITVSTGYYGASADLIQ 60
            M+  D+FI+RPVLA  IS LI+++G QA+ ++ +R+YPEM+NTVITV+T Y GA++DLIQ
Sbjct: 1    MKAFDLFIRRPVLATVISLLILVVGFQALMRLPIRQYPEMSNTVITVTTTYPGANSDLIQ 60

Query: 61   GFITQPLEQAVAQADNIDFMTSQSVLGRSTITVTMKLNTDPNAALSDVLAKTNSVRSQLP 120
            GF+TQP+++AV+ +  +D++TS S  G ST+   ++LN DP+AA+++V AK N VRS LP
Sbjct: 61   GFVTQPIQKAVSTSKGLDYLTSSSSQGVSTVKAFVRLNEDPDAAMTEVTAKVNEVRSLLP 120

Query: 121  KEAEDPTVTMSTGSTTAVLYIGFTSNELASSQITDYLERVVNPQLYAVNGVSSIDLYGGM 180
            +  ++P ++  TG T    +I F+S   +  QITDY+ RV+ P+L AV+GVS+ +++G  
Sbjct: 121  RNVDNPVISKETGETFPAAFIAFSSKSHSQEQITDYVNRVIQPKLAAVSGVSNPEVFGAK 180

Query: 181  KYALRVWLDPAKMAALNLSAADVMSILNANNYQSATGQAIGEFVLYNGSADTQVSTVEDL 240
             +++RVWLDP KMA   L+A+DV + L ANN+ SA G   G   + N  A+T ++ + + 
Sbjct: 181  NFSIRVWLDPEKMAQQGLTASDVQTALTANNFSSAAGSIKGSLDIINTKAETDLTDIAEF 240

Query: 241  ESLVVKAEKGTVTRLGDIAKVTLAKSHDTYRASANGREAVVAAINAAPSANPINIAKDVL 300
              LVV+ +   + RL DI +V+LA         A+G+ A+   +   P ANP+++  ++ 
Sbjct: 241  RKLVVRNDGARLIRLQDIGEVSLAAESSDMSVFASGQAAIFVGVFTTPEANPLSVIAEIR 300

Query: 301  EM-LPELQKNMPSNIEMNVLYDSTVAINESIHEVIKTIVEAALIVLVVITLFLGSLRAVL 359
            E  LP +   +P  +   + YDSTV I ESI EV+KTIVEAA+IV+VVI LF+GS+R+V+
Sbjct: 301  ETALPAIIDQLPEGMTALMAYDSTVFITESIREVVKTIVEAAIIVMVVIFLFMGSVRSVV 360

Query: 360  IPIVTIPLSLIGVAMVMQMMGFSWNLMTLLAMVLAIGLVVDDAIVVLENVDRHIKEGESP 419
            IP+VT+PLSL+GVA+++ ++GFS NL+TLLAMVLAIGLVVDDAIVV+ENV RHI+EG +P
Sbjct: 361  IPLVTVPLSLVGVAILLMVLGFSINLLTLLAMVLAIGLVVDDAIVVVENVHRHIEEGSTP 420

Query: 420  FRAAIIGTREIAIPVIAMTLTLGAVYAPIALMGGITGSLFKEFALTLAGSVFVSGIVALT 479
            F+AAI GTREIA+PVI+MT+TL AVYAPIA MGG+TG+LF+EFAL LAGSV VSG+VALT
Sbjct: 421  FQAAIDGTREIALPVISMTITLAAVYAPIAFMGGLTGALFREFALALAGSVVVSGVVALT 480

Query: 480  LSPMMCSKMLKANEAPNKFELKVHHLLDRMTARYERMLTAVMAHRPVVIAFAFIVFASLP 539
            LSPMMCSK+L+       F  K+  L +R+  RY R+L A +A RP  + FA IV  SL 
Sbjct: 481  LSPMMCSKILRHEVTKKGFAAKLDSLFERLQGRYGRLLDASLADRPTTVVFALIVMGSLY 540

Query: 540  MLFKFIPSELAPSEDKGVIMLMGTGPSNANLDYLANTMDDVNKILSDQPEVQFAQVFTGV 599
             LF  IPSELAP ED+G ++    GP++A+ DY+   +  ++  L   PE +   +  G+
Sbjct: 541  FLFSAIPSELAPDEDQGAVLTAFNGPASASNDYMNVFVHQIDDALRAYPETEHTFLIAGI 600

Query: 600  PNSNQAFGIASMVPWSQREASQATVTNRVGTLVQDIPGMAVTAFQMPELPGAGSGLPIQF 659
               N  FG AS+ PW++RE     +   V T +  I G+  + F    LPGA  GLP+QF
Sbjct: 601  GTPNSGFGGASLKPWAERERDAKALIGAVQTTMNGIAGVKASVFSPAALPGA-DGLPVQF 659

Query: 660  VITTPSNFESLFTIATDVLTEVKANPMFVYSDLDLNFDSATMKINIDKDKAGAYGVTMQD 719
            VI++ + +E++  I  +++   +A+  F+++D DL F+S    +++D+DKA AYG+TM  
Sbjct: 660  VISSTTPYEAISDIQDEMMKRAQASGRFIFTDTDLKFESPQTVVSVDRDKAAAYGITMDQ 719

Query: 720  IGITLSTMMADGYVNRIDLNGRSYEVIPQVERKWRLNPESMNSYYVRAADGKVIPLGSLV 779
            IG  L+TM    YVN +++ GRSY+VIPQV    R++P+S+  +Y+R   G  IPL SLV
Sbjct: 720  IGGALATMTGGNYVNLVNIQGRSYKVIPQVPDSARMDPDSLGRFYIRTHSGTAIPLSSLV 779

Query: 780  TIDVVAEPRSLPHFNQLNSATVGAVPAPGTAMGDAINWFENLASSKLPKGYSHDYMGEAR 839
            T++    P+SL  FNQLN+ T+   P PG  +G A+   E  A+  LP GY+ DY G++R
Sbjct: 780  TLERRVLPQSLNQFNQLNAFTISGFPMPGVTLGQALAVLEQSAAEVLPSGYTIDYAGQSR 839

Query: 840  QYVTEGSALYATFGLALAIIFLVLAIQFESLRDPLVIMVSVPLAICGALIALAWGTATMN 899
            Q++ EGS+L  TF  AL IIFLVLA QFES RDPLVIM+SVPL+ICGAL+ LA G  TMN
Sbjct: 840  QFIQEGSSLIGTFVFALIIIFLVLAAQFESFRDPLVIMISVPLSICGALLPLALGATTMN 899

Query: 900  IYSQVGLITLVGLITKHGILICEVAKEEQLHNKLSRIEAVMHAAKVRLRPILMTTAAMIA 959
            IY+QVGL+TL+GLITKHGIL+CEVA+E Q    L+R +A+  AAK+RLRPILMTTAAM+A
Sbjct: 900  IYTQVGLVTLIGLITKHGILMCEVARERQEEQGLTRAQAIEVAAKLRLRPILMTTAAMVA 959

Query: 960  GLIPLMYATGAGAAQRFSIGIVIVSGLAIGTLFTLFVLPVIYSYLAE 1006
            GLIPLM+A+GAGA  RFSI +VIV+G++IGTLFTLFVLPVIY++LAE
Sbjct: 960  GLIPLMFASGAGANSRFSIAVVIVAGMSIGTLFTLFVLPVIYTFLAE 1006