Pairwise Alignments

Query, 1036 a.a., multidrug resistance protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1037 a.a., Acriflavin resistance protein (NCBI) from Rhodospirillum rubrum S1H

 Score =  593 bits (1530), Expect = e-173
 Identities = 354/1011 (35%), Positives = 567/1011 (56%), Gaps = 9/1011 (0%)

Query: 1    MRFTDVFIKRPVLAVSISFLIVLLGLQAIFKMQVREYPEMTNTVITVSTGYYGASADLIQ 60
            M  + +FI+RPV A  +S L+V++G+ A+ ++ VRE P++ + V++V+T Y GA+ +++ 
Sbjct: 1    MDVSSLFIRRPVFATVLSLLLVVMGIAAMTRLAVRELPDIDSAVVSVTTPYTGAAPEIVD 60

Query: 61   GFITQPLEQAVAQADNIDFMTSQSVLGRSTITVTMKLNTDPNAALSDVLAKTNSVRSQLP 120
              IT+ +E AVA    I  +TSQS  G+    +  +     + A++DV      VR  LP
Sbjct: 61   TDITEVIENAVAGVSGIRTITSQSRRGQGRTVIEFESGVSMDEAVNDVRDAVAKVRGDLP 120

Query: 121  KEAEDPTVTMSTGSTTAVLYIGFTSNELASSQITDYLERVVNPQLYAVNGVSSIDLYGGM 180
             + E+P +  S   +  V+ +  TS  +   ++TD+ +R +  +L  ++GV+ +DLYG  
Sbjct: 121  DDIEEPRIAKSDTDSDPVMRLSLTSPRMTPIELTDFADRYIVDRLATIDGVAQVDLYGER 180

Query: 181  KYALRVWLDPAKMAALNLSAADVMSILNANNYQSATGQAIGEFVLYNGSADTQVSTVEDL 240
            + A+R+WLD   MAA  ++  DV + L   N +   G+      L    A T +++ E  
Sbjct: 181  RQAIRLWLDRRAMAARQVTVQDVEAALRRANVELPAGEIESASRLLTVRAATLLTSPEAF 240

Query: 241  ESLVVKAEKGTVTRLGDIAKVTLAKSHDTYRASANGREAVVAAINAAPSANPINIAKDVL 300
             S V+K   G   R+ D+A+V L   +D       GR+A+   +     AN + I+  + 
Sbjct: 241  GSTVIKVVDGYPLRVRDVARVELGVENDDTTVRVEGRDALTMGVLRQSQANTVAISNRIR 300

Query: 301  EMLPELQKNMPSNIEMNVLYDSTVAINESIHEVIKTIVEAALIVLVVITLFLGSLRAVLI 360
              +  L+ ++P  + + V  D  + IN SIHEVI T+  + LIV++V   FLGS+RA L+
Sbjct: 301  AEIDRLRPSLPEGMSLEVSSDDALFINRSIHEVILTLGLSGLIVIIVNFAFLGSIRATLV 360

Query: 361  PIVTIPLSLIGVAMVMQMMGFSWNLMTLLAMVLAIGLVVDDAIVVLENVDRHIKEGESPF 420
            P VTIP+++IG  + + ++GFS NL+TLLA++L+IGLVVDDAIVVLEN+ R I+ GE   
Sbjct: 361  PTVTIPVAVIGTFIGILLLGFSINLLTLLALILSIGLVVDDAIVVLENIQRRIEAGEPKL 420

Query: 421  RAAIIGTREIAIPVIAMTLTLGAVYAPIALMGGITGSLFKEFALTLAGSVFVSGIVALTL 480
             AA  GTR++   V+A +LTL AV+ PI+ M G  G LF EF   LA +V +S +VALTL
Sbjct: 421  VAAARGTRQVTFAVVATSLTLIAVFVPISFMEGTVGRLFTEFGFVLACAVAISMLVALTL 480

Query: 481  SPMMCSKMLKANEAPNKFELKVHHLLDRMTARYERMLTAVMAHRPVVIAFAFIVFASLPM 540
             P + + +L   +A  +    +++    ++  Y+R L+AV+    VV+  A +   +   
Sbjct: 481  CPPLAAGVLAEGKAEGRLAHALNYAFGTLSRGYQRALSAVLGLPMVVLTVALLCGGASFW 540

Query: 541  LFKFIPSELAPSEDKGVIMLMGTGPSNANLDYLANTMDDVNKILS---DQPEVQFAQVFT 597
            L++ +P EL P ED+GV+++   GP  AN  Y    +  V   +    D+ E        
Sbjct: 541  LYQGLPKELVPVEDRGVVVVSLNGPQGANTRYTDTQIRAVEAAVQPVLDRGEAVGVLAQV 600

Query: 598  GVPN-SNQAFGIASMVPWSQREASQATVTNRVGTLVQDIPGMAVTAFQMPELPGAGSGLP 656
            G  N  ++ + +  +  W  R  + + +   +   +  + G   T      L   GS  P
Sbjct: 601  GQWNRPHRGYVVIRLDDWENRGRTASALAESLRKDLGKLAGATATPVVPAGLGLRGSRTP 660

Query: 657  IQFVITTPSNFESLFTIATDVLTEVKANPMFVYSDLDLNFDSATMKINIDKDKAGAYGVT 716
            +Q VI  P ++  +   A  +L   +  P  +  +LD   +   + + ID+D+A   GV 
Sbjct: 661  LQVVIGGP-DYAEVEVWANALLKRAEELPGLINPELDFEQNQPQLSVGIDRDRADDLGVG 719

Query: 717  MQDIGITLSTMMADGYVNRIDLNGRSYEVIPQVERKWRLNPESMNSYYVRA-ADGKVIPL 775
            ++ IG TL TM+A   V R    GR Y+V+ Q   + R  P  +++ +VRA   G ++PL
Sbjct: 720  VEAIGQTLQTMLASREVTRFVDRGREYQVVVQARPEDRRTPSDLSNTFVRAEKGGALVPL 779

Query: 776  GSLVTIDVVAEPRSLPHFNQLNSATVGAVPAPGTAMGDAINWFENLASSKLPKGYSHDYM 835
             +LV +   A    L  + +L S T+ +  APG  MG AI+    LAS  +P        
Sbjct: 780  DALVILKETAGAPDLNRYARLPSITLQSALAPGYDMGQAIDDVMALASQTVPPEARLSLA 839

Query: 836  GEARQYVTEGSALYATFGLALAIIFLVLAIQFESLRDPLVIMVSVPLAICGALIALAWGT 895
            G++++++     +  TF +AL I++LVLA QFES   PL+IM+SVPLA+ GAL++L W T
Sbjct: 840  GQSKEFLETSGGVLFTFLMALVIVYLVLAAQFESFLHPLIIMLSVPLAVSGALLSL-WAT 898

Query: 896  A-TMNIYSQVGLITLVGLITKHGILICEVAKEEQLHNKLSRIEAVMHAAKVRLRPILMTT 954
              ++N+YSQ+G++ L+GL  K+GILI E A + +   +  R EA++ AA +RLRPILMT 
Sbjct: 899  GNSINVYSQIGIVLLIGLTAKNGILIVEFANQLRDEGRSVR-EAILEAASLRLRPILMTV 957

Query: 955  AAMIAGLIPLMYATGAGAAQRFSIGIVIVSGLAIGTLFTLFVLPVIYSYLA 1005
               I G +PL +++GAGA  R +IGIV++ GL + +L TLFV PV+Y  LA
Sbjct: 958  ICTILGAVPLAWSSGAGAESREAIGIVVIGGLGLASLLTLFVTPVLYDLLA 1008