Pairwise Alignments

Query, 1036 a.a., multidrug resistance protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1029 a.a., multidrug efflux RND transporter permease MexI from Pseudomonas aeruginosa PA14

 Score =  935 bits (2417), Expect = 0.0
 Identities = 464/1008 (46%), Positives = 693/1008 (68%), Gaps = 1/1008 (0%)

Query: 1    MRFTDVFIKRPVLAVSISFLIVLLGLQAIFKMQVREYPEMTNTVITVSTGYYGASADLIQ 60
            M FTD+F++RPVLA+ +S LI+LLGL ++ K+ +R+YP + ++ ITV+T Y GASADL+Q
Sbjct: 1    MTFTDLFVRRPVLALVVSTLILLLGLFSLGKLPIRQYPLLESSTITVTTEYPGASADLMQ 60

Query: 61   GFITQPLEQAVAQADNIDFMTSQSVLGRSTITVTMKLNTDPNAALSDVLAKTNSVRSQLP 120
            GF+TQP+ QAV+  + ID+++S SV GRS +T+ M LN D   A+++ +AK NSVR +LP
Sbjct: 61   GFVTQPIAQAVSSVEGIDYLSSTSVQGRSVVTIRMLLNRDSTQAMTETMAKVNSVRYKLP 120

Query: 121  KEAEDPTVTMSTGSTTAVLYIGFTSNELASSQITDYLERVVNPQLYAVNGVSSIDLYGGM 180
            + A D  +  S+G TTAV Y+GF+S  L    +TDYL RVV P   +++GV+ +  +GG 
Sbjct: 121  ERAYDSVIERSSGETTAVAYVGFSSKTLPIPALTDYLSRVVEPMFSSIDGVAKVQTFGGQ 180

Query: 181  KYALRVWLDPAKMAALNLSAADVMSILNANNYQSATGQAIGEFVLYNGSADTQVSTVEDL 240
            + A+R+WLD  ++A   L+A+DV   +  NNYQ+A G   G++VL N   +T ++ V+D 
Sbjct: 181  RLAMRLWLDADRLAGRGLTASDVAEAIRRNNYQAAPGMVKGQYVLSNVRVNTDLTNVDDF 240

Query: 241  ESLVVKAEKGTVTRLGDIAKVTLAKSHDTYRASANGREAVVAAINAAPSANPINIAKDVL 300
              +V++ +   + RL D+  V L  +     A  +G  AV   +   P+ NP+ I   + 
Sbjct: 241  REMVIRNDGNGLVRLRDVGTVELGAAATETSALMDGDPAVHLGLFPTPTGNPLVIVDGIR 300

Query: 301  EMLPELQKNMPSNIEMNVLYDSTVAINESIHEVIKTIVEAALIVLVVITLFLGSLRAVLI 360
            ++LPE+QK +P ++ +++ Y+++  I  SI EV++T+VEA LIV++VI L LGSLR+VLI
Sbjct: 301  KLLPEIQKTLPPDVRVDLAYETSRFIQASIDEVVRTLVEALLIVVLVIYLCLGSLRSVLI 360

Query: 361  PIVTIPLSLIGVAMVMQMMGFSWNLMTLLAMVLAIGLVVDDAIVVLENVDRHIKEGESPF 420
            P+ TIPLS++G A +M   GFS NL+TLLAMVLAIGLVVDDAIVV+ENV RHI+EG+SP 
Sbjct: 361  PVATIPLSMLGAAALMLAFGFSVNLLTLLAMVLAIGLVVDDAIVVVENVHRHIEEGKSPV 420

Query: 421  RAAIIGTREIAIPVIAMTLTLGAVYAPIALMGGITGSLFKEFALTLAGSVFVSGIVALTL 480
             AA+IG RE+A PVIAMT+TL AVY PI LMGG+TG+LF+EFALTLAG+V VSG+VALTL
Sbjct: 421  AAALIGAREVAGPVIAMTITLAAVYTPIGLMGGLTGALFREFALTLAGAVIVSGVVALTL 480

Query: 481  SPMMCSKMLKANEAPNKFELKVHHLLDRMTARYERMLTAVMAHRPVVIAFAFIVFASLPM 540
            SP+M S +L+A++   +           +T RY ++L   + HR +    A +V  SLP+
Sbjct: 481  SPVMSSLLLQAHQNEGRMGRAAEWFFGGLTRRYGQVLEFSLGHRWLTGGLALLVCISLPL 540

Query: 541  LFKFIPSELAPSEDKGVIMLMGTGPSNANLDYLANTMDDVNKILSDQPEVQFAQVFTGVP 600
            L+     ELAP+ED+  ++     P +ANLDY+      ++++ +  PE     +  G  
Sbjct: 541  LYSMPKRELAPTEDQAAVLTAIKAPQHANLDYVELFARKLDQVYTSIPETVSTWIINGTD 600

Query: 601  NSNQAFGIASMVPWSQREASQATVTNRVGTLVQDIPGMAVTAFQMPELPGAGSGLPIQFV 660
                +FG  ++  W +RE   + + + +   V D+ G ++ AFQ+  LPG+  GLP+Q V
Sbjct: 601  GPAASFGGINLAAWEKRERDASAIQSELQGKVGDVEGSSIFAFQLAALPGSTGGLPVQMV 660

Query: 661  ITTPSNFESLFTIATDVLTEVKANPMFVYSDLDLNFDSATMKINIDKDKAGAYGVTMQDI 720
            + +P ++  L+    ++  + + + +FV  D DL++++  +++ ID+ KA + G+ MQDI
Sbjct: 661  LRSPQDYPVLYRTMEEIKQKARQSGLFVVVDSDLDYNNPVVQVRIDRAKANSLGIRMQDI 720

Query: 721  GITLSTMMADGYVNRIDLNGRSYEVIPQVERKWRLNPESMNSYYVRAADGKVIPLGSLVT 780
            G +L+ ++ + YVNR  + GRSY+VIPQ  R  R  P+++   +VR  DG ++PL ++V 
Sbjct: 721  GESLAVLVGENYVNRFGMEGRSYDVIPQSLRDQRFTPQALARQFVRTQDGNLVPLSTVVR 780

Query: 781  IDVVAEPRSLPHFNQLNSATVGAVPAPGTAMGDAINWFENLASSKLPKGYSHDYMGEARQ 840
            +++  EP  L  F+Q N+AT+ A+PAPG +MG A+ + +++A   LP G+SHD+  ++RQ
Sbjct: 781  VELQVEPNKLIQFDQQNAATLQAIPAPGVSMGQAVAFLDDVARG-LPAGFSHDWQSDSRQ 839

Query: 841  YVTEGSALYATFGLALAIIFLVLAIQFESLRDPLVIMVSVPLAICGALIALAWGTATMNI 900
            Y  EG+ L   F  AL +I+LVLA Q+ESL DPL+I+++VPL+ICGAL+ LA G ATMNI
Sbjct: 840  YTQEGNTLVFAFLAALVVIYLVLAAQYESLADPLIILITVPLSICGALLPLALGYATMNI 899

Query: 901  YSQVGLITLVGLITKHGILICEVAKEEQLHNKLSRIEAVMHAAKVRLRPILMTTAAMIAG 960
            Y+Q+GL+TL+GLI+KHGIL+ E A E QLH +L R  A++ AA++RLRP+LMTTAAM+ G
Sbjct: 900  YTQIGLVTLIGLISKHGILMVEFANELQLHERLDRRAAILRAAQIRLRPVLMTTAAMVFG 959

Query: 961  LIPLMYATGAGAAQRFSIGIVIVSGLAIGTLFTLFVLPVIYSYLAEKH 1008
            L+PL++A+GAGAA RF +G+VIVSG+ +GTLFTLFVLP +Y+ LA  H
Sbjct: 960  LVPLLFASGAGAASRFGLGVVIVSGMLVGTLFTLFVLPTVYTLLARNH 1007