Pairwise Alignments

Query, 1036 a.a., multidrug resistance protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1042 a.a., acriflavin resistance protein (RefSeq) from Shewanella loihica PV-4

 Score =  639 bits (1649), Expect = 0.0
 Identities = 377/1017 (37%), Positives = 591/1017 (58%), Gaps = 18/1017 (1%)

Query: 1    MRFTDVFIKRPVLAVSISFLIVLLGLQAIFKMQVREYPEMTNTVITVSTGYYGASADLIQ 60
            M  TD+ +KRPV A  IS L++  GL +  K+ +REYP +   +++V T Y GASA +++
Sbjct: 1    MILTDLSVKRPVFASVISMLLIAFGLVSFDKLPLREYPNIDPPIVSVQTNYRGASAAVVE 60

Query: 61   GFITQPLEQAVAQADNIDFMTSQSVLGRSTITVTMKLNTDPNAALSDVLAKTNSVRSQLP 120
              ITQ +E  ++  + I  + S S  GRS++T+   +  D  AA +DV  + + + + LP
Sbjct: 61   SRITQLVEDRISGVEGIRNINSSSSDGRSSVTLEFDVGRDIEAAANDVRDRISGLLNNLP 120

Query: 121  KEAEDPTVTMSTGSTTAVLYIGFTSNELASSQITDYLERVVNPQLYAVNGVSSIDLYGGM 180
            +EA+ P V  + G    ++++   S+++ + Q+TDY  R +  +   ++GV++I + GG 
Sbjct: 121  EEADPPEVQKANGGDEVIMWLNLVSDQMNTLQLTDYARRYLVDRFSVIDGVANIRIGGGK 180

Query: 181  KYALRVWLDPAKMAALNLSAADVMSILNANNYQSATGQAIGEFVLYNGSADTQVSTVEDL 240
             YA+RVW+D   +AA NL+ +D+ S+L + N +   G    +   +    +    T ED 
Sbjct: 181  VYAMRVWIDRQALAARNLTVSDIESVLRSENVELPAGSVESQDRHFTVRLERTFKTAEDF 240

Query: 241  ESLVV-KAEKGTVTRLGDIAKVTLAKSHDTYRASANGREAVVAAINAAPSANPINIAKDV 299
             +LV+ + E G + +LGD+A+V +    +      N    +   I+   ++N + +A+  
Sbjct: 241  NNLVLAEGEDGYLIKLGDVARVEIGSEEERITFRGNREAMIGLGISKQSTSNTLEVARAA 300

Query: 300  LEMLPELQKNMPSNIEMNVLYDSTVAINESIHEVIKTIVEAALIVLVVITLFLGSLRAVL 359
              ++ ++   +P+ +E+   YDS+V I  SI EV +T+  A  +V+VVI LFLGS+RA+L
Sbjct: 301  NALVDKINPTLPAGMEIKRSYDSSVFIEASIKEVYQTLFIAMFLVIVVIYLFLGSVRAML 360

Query: 360  IPIVTIPLSLIGVAMVMQMMGFSWNLMTLLAMVLAIGLVVDDAIVVLENVDRHIKEGESP 419
            IP +T+P+SL+   +V+  +G++ NL+TLLAM+LAIG+VVDDAIVVLEN+ R I+EG+SP
Sbjct: 361  IPALTVPVSLMATFIVLYALGYTINLLTLLAMILAIGMVVDDAIVVLENIHRRIEEGDSP 420

Query: 420  FRAAIIGTREIAIPVIAMTLTLGAVYAPIALMGGITGSLFKEFALTLAGSVFVSGIVALT 479
             +AA +G+RE+A  V+A TL L AV+ PI  + G  G LFKEFA+ ++ +V  S +VALT
Sbjct: 421  LKAAYLGSREVAFAVVATTLVLVAVFMPITFLEGDLGKLFKEFAVAMSAAVIFSSLVALT 480

Query: 480  LSPMMCSKMLKANEAPNKFELKVHHLLDRMTARYERMLTAVMAHRPVVIAFAFIVFASLP 539
            LSPMMCSK+LK          K+   ++ ++A Y   L   M H  +V +   I      
Sbjct: 481  LSPMMCSKLLKPAGQDPWLVRKIDAGMNWLSAGYRATLKRAMIHPFIVSSLVVIALGLSG 540

Query: 540  MLFKFIPSELAPSEDKGVIMLMGTGPSNANLDYLANTMDDV-NKI--LSDQPEVQFAQV- 595
             L   +P E AP ED+G + L+  GP  A+ +Y++  MD++ N++  L D  +++   + 
Sbjct: 541  YLMTKVPQEFAPQEDRGSMFLIVNGPQGASFEYISPYMDEIENRLMPLVDSGDIKRLLIR 600

Query: 596  ----FTGVPNSNQAFGIASMVPWSQREASQATVTNRVGTLVQDIPGMAVTAFQ-MPELPG 650
                F    N +    I  +  W+ R  S   +   +   + D+ G  V AF  M +  G
Sbjct: 601  APRGFGRSANFSNGMAIIVLEDWADRR-SAFEIIGDIRARLSDLAG--VRAFPVMRQAFG 657

Query: 651  AGSGLPIQFVITTPSNFESLFTIATDVLTEVKANPMFVYSDLDLNFDSATMKINIDKDKA 710
             G G P+QFV+  PS +E L      +L + K NP  V  D D       +++ IDKD+A
Sbjct: 658  RGVGKPVQFVLGGPS-YEELAKWRDILLEKAKENPNLVGLDHDYQETKPQLRVVIDKDRA 716

Query: 711  GAYGVTMQDIGITLSTMMADGYVNRIDLNGRSYEVIPQVERKWRLNPESMNSYYVRA-AD 769
               GV++  IG TL +M+    V     +G  Y+VI +  R  +     +++ YVR+   
Sbjct: 717  ADLGVSISHIGRTLESMLGSRLVTTFMRDGEEYDVIIEGNRDNQNTASDLSNIYVRSDRS 776

Query: 770  GKVIPLGSLVTIDVVAEPRSLPHFNQLNSATVGAVPAPGTAMGDAINWFENLASSKLPKG 829
             ++IPL +LV+++  A+   L  +N++ + T+ A  A G ++G+A+++  NLA + LP  
Sbjct: 777  RELIPLANLVSVEEFADASQLNRYNRMRAITIEANLADGYSLGEALDYLNNLAYTYLPAE 836

Query: 830  YSHDYMGEARQYVTEGSALYATFGLALAIIFLVLAIQFESLRDPLVIMVSVPLAICGALI 889
                Y G++  Y   GS++Y  F LAL I+FLVLA QFES   P+VIM++VPLA  GALI
Sbjct: 837  AVISYKGQSLDYQESGSSMYFVFLLALGIVFLVLAAQFESYIHPMVIMLTVPLATLGALI 896

Query: 890  ALAWGTATMNIYSQVGLITLVGLITKHGILICEVAKEEQLHNKLSRIE-AVMHAAKVRLR 948
             L     ++NIYSQ+G+I LVGL  K+GILI E A   QL +K    + A++ AA  RLR
Sbjct: 897  GLWVTGQSLNIYSQIGIIMLVGLAAKNGILIVEFA--NQLRDKGIEFDTAIIQAASQRLR 954

Query: 949  PILMTTAAMIAGLIPLMYATGAGAAQRFSIGIVIVSGLAIGTLFTLFVLPVIYSYLA 1005
            PILMT     AG IPL+ A GAGA  RF IG+V++SG+ + T FTL V+PV Y  +A
Sbjct: 955  PILMTGITTAAGAIPLVLAQGAGAETRFVIGVVVLSGIILATFFTLLVIPVAYGLIA 1011