Pairwise Alignments

Query, 1036 a.a., multidrug resistance protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1042 a.a., acriflavin resistance protein (RefSeq) from Shewanella loihica PV-4

 Score =  571 bits (1472), Expect = e-167
 Identities = 353/1029 (34%), Positives = 567/1029 (55%), Gaps = 25/1029 (2%)

Query: 1    MRFTDVFIKRPVLAVSISFLIVLLGLQAIFKMQVREYPEMTNTVITVSTGYYGASADLIQ 60
            M  +DV +KRPV+A+ +S L+ + GL +  K+ VRE P++ + V+TV T Y GASA +++
Sbjct: 1    MLLSDVSVKRPVVALVLSLLLCVFGLVSFSKLAVREMPDVESPVVTVMTSYSGASASIME 60

Query: 61   GFITQPLEQAVAQADNIDFMTSQSVLGRSTITVTMKLNTDPNAALSDVLAKTNSVRSQLP 120
              IT  LE  +     ID +TS +  G S IT++  L+ +    +SDV       + +LP
Sbjct: 61   SQITTVLEDELTGISGIDEITSVTRNGMSRITISFDLDWNLTEGVSDVRDAVARAQRRLP 120

Query: 121  KEAEDPTVTMSTGSTTAVLYIGFTSNELASSQITDYLERVVNPQLYAVNGVSSIDLYGGM 180
             EA++P V+   GS    +YI  +S+ +  +Q+TDY +RV+  +   + GVSS+++ GG+
Sbjct: 121  DEADEPIVSKDNGSGEPSVYINLSSSTMDRTQLTDYAQRVLEDRFSLITGVSSVNISGGL 180

Query: 181  KYALRVWLDPAKMAALNLSAADVMSILNANNYQSATGQAIGEFVLYNGSADTQVSTVEDL 240
               + V LDP  MA   ++  D+   L + N +S  G+   +  +            ED 
Sbjct: 181  YKVMYVQLDPKLMAGRGVTTTDITDALRSENVESPGGEVRNDTTVMTVRTARLYLHPEDF 240

Query: 241  ESLVVK-AEKGTVTRLGDIAKVTLAKSHDTYRASANGREAVVAAINAAPSANPINIAKDV 299
            + LVV+ A  G+   L D+A+V +   ++     ++G   +   I A   ANP+ +A+ V
Sbjct: 241  DYLVVRTASDGSPIYLKDVARVFIGAENENSTFKSDGVPNLSLGIVAQSDANPLQVAQRV 300

Query: 300  LEMLPELQKNMPSNIEMNVLYDSTVAINESIHEVIKTIVEAALIVLVVITLFLGSLRAVL 359
             E + +LQK +P   +++V YDSTV I++SI EV  T+     +V++V+ LF+G  RA L
Sbjct: 301  REEVDKLQKFLPEGTQLSVDYDSTVFIDQSIGEVYNTLYITGALVVLVLYLFIGQARATL 360

Query: 360  IPIVTIPLSLIGVAMVMQMMGFSWNLMTLLAMVLAIGLVVDDAIVVLENVDRHIKEGESP 419
            IP VT+P+SLI   +    +G+S NL+TL+A++LAIGLVVDDAIVV+EN+  HI+ GE  
Sbjct: 361  IPAVTVPVSLISAFIAANYLGYSINLLTLMALILAIGLVVDDAIVVVENIFHHIERGEPA 420

Query: 420  FRAAIIGTREIAIPVIAMTLTLGAVYAPIALMGGITGSLFKEFALTLAGSVFVSGIVALT 479
              AA  G RE+   V+A T  L  V+ PI+ M G+ G LF EFA+ LA +V  S ++ALT
Sbjct: 421  ILAAYKGAREVGFAVVATTAVLVMVFLPISFMDGMVGRLFTEFAVMLAMAVIFSSVIALT 480

Query: 480  LSPMMCSKMLKANEAPNKFELKVHHLLDRMTARYERMLTAVMAHR---PVVIAFAFIVFA 536
            L+P++ SK+LK    P      +     R+ A Y R +   + +R   PVVI    I   
Sbjct: 481  LTPVLGSKLLKRKHRPKALNRLMDSGFARLEAWYRRAVAWAVRYRLAAPVVIVACVI--- 537

Query: 537  SLPMLFKFIPSELAPSEDKGVIMLMGTGPSNANLDYLANTMDDVNK----ILSDQPEVQF 592
               +L   +P++LAP ED+GVI     G    + + + + MD V +    +LS      F
Sbjct: 538  GSGLLMNQVPAQLAPQEDRGVIFAFVKGAEGTSYNRMTSNMDIVEQRLMPLLSQGVIKSF 597

Query: 593  ---AQVFTGVPNSNQAFGIASMVPWSQREASQATVTNRVGTLVQDIPGMAVTAFQMPELP 649
               A  F G       F I  +  W  R+ +       V   ++ IP + V     P LP
Sbjct: 598  SVQAPAFGGRAGDQTGFVIMQLEDWQARDINAQQALAVVAKALKGIPDVMV----RPMLP 653

Query: 650  G--AGSGLPIQFVITTPSNFESLFTIATDVLTEVKANPMFVYSDLDLNFDSATMKINIDK 707
            G    S  P+QFV+   S+++ LF  A+ +     A+P+   +DLD    +  + +++D+
Sbjct: 654  GFRGKSSEPVQFVL-GGSDYDELFKWASKLKAIADASPIVTGADLDYAETTPELVVSVDR 712

Query: 708  DKAGAYGVTMQDIGITLSTMMADGYVNRIDLNGRSYEVIPQVERKWRLNPESMNSYYVRA 767
             +A   G+++  +  TL  M+           G  Y+V  + + +   +   ++  Y+RA
Sbjct: 713  QRAAELGISVAQVSQTLEVMLGGRSETSFIERGEEYDVYLRGKEESFNSMADLSQIYMRA 772

Query: 768  ADGKVIPLGSLVTIDVVAEPRSLPHFNQLNSATVGAVPAPGTAMGDAINWFENLASSKLP 827
            A+G++I L ++  I+ VA    L H N+  S T+ A    G  +G+A+++ +  A   LP
Sbjct: 773  ANGELITLDAITHIEEVASAHKLSHTNKQKSITLKANLGEGYTLGEALDFLDAKAIEILP 832

Query: 828  KGYSHDYMGEARQYVTEGSALYATFGLALAIIFLVLAIQFESLRDPLVIMVSVPLAICGA 887
               S  Y GE++++    S++   F LAL + +LVLA QFES  +PLV+M++VP+ I G 
Sbjct: 833  GDISISYTGESKEFKENQSSVMLVFALALLVAYLVLAAQFESFINPLVVMLTVPMGIFGG 892

Query: 888  LIALAWGTATMNIYSQVGLITLVGLITKHGILICEVAKEEQLHNKLSRIE-AVMHAAKVR 946
             I L      +NIYSQ+G+I L+G++TK+GILI E A   QL ++ + +E A++ A+  R
Sbjct: 893  FIGLYLMGLGLNIYSQIGMIMLIGMVTKNGILIVEFA--NQLRDRGASLEQAILDASARR 950

Query: 947  LRPILMTTAAMIAGLIPLMYATGAGAAQRFSIGIVIVSGLAIGTLFTLFVLPVIYSYLAE 1006
            LRPILMT    + G +PL+ ++GAG+  R ++G V+  G+A  TL TL V+P +Y  ++ 
Sbjct: 951  LRPILMTAFTTLVGAVPLILSSGAGSESRIAVGTVVFFGMAFATLVTLLVIPAMYRLISG 1010

Query: 1007 KHKPLPVFV 1015
            + +  P FV
Sbjct: 1011 RTRS-PGFV 1018