Pairwise Alignments

Query, 1036 a.a., multidrug resistance protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1034 a.a., transporter, hydrophobe/amphiphile efflux-1 (HAE1) family from Marinobacter adhaerens HP15

 Score =  531 bits (1368), Expect = e-155
 Identities = 347/1028 (33%), Positives = 550/1028 (53%), Gaps = 38/1028 (3%)

Query: 6    VFIKRPVLAVSISFLIVLLGLQAIFKMQVREYPEMTNTVITVSTGYYGASADLIQGFITQ 65
            VFI RP  A  IS LI L GL A+  + V  YP+M    I V+    GAS+ +++  + +
Sbjct: 5    VFIHRPKFAFVISILITLAGLLALRILPVNMYPDMAPPQIQVNASLPGASSQVVEEAVIR 64

Query: 66   PLEQAVAQADNIDFMTSQ-SVLGRSTITVTMKLNTDPNAALSDVLAKTNSVRSQLPKEAE 124
            P+EQ +   + + ++ S  S  G + IT+T +  TD + A  +V  +       LP E  
Sbjct: 65   PVEQQLNGVEGMIYIESTASSDGTAKITLTFESGTDTDIAQVNVQNRVALAEPFLPDEVR 124

Query: 125  DPTVTMSTGSTTAVLYIGFTSN--ELASSQITDYLERVVNPQLYAVNGVSSIDLYGGMKY 182
               V +S  +   ++ I  TS   +L    +++Y    +   L  V GV S ++ G   Y
Sbjct: 125  RQGVVVSKQAGNMLMGINLTSERPDLDGVFLSNYASNNLVEALGRVPGVGSAEVMGAKDY 184

Query: 183  ALRVWLDPAKMAALNLSAADVMSILNANNYQSATGQA------IGEFVLYNGSADTQVST 236
            ++RVWLDP +MA+L+++ A+V + L   N   A G+        G+  +Y+     ++S 
Sbjct: 185  SMRVWLDPRRMASLDVTVAEVAAALREQNQIVAAGKLGQPPVPAGQQFVYSIQTRERLSD 244

Query: 237  VEDLESLVVKAEK-GTVTRLGDIAKVTLAKSHDTYRASANGREAVVAAINAAPSANPINI 295
             ++    ++++   G   RL D+ ++ L     T  A  N ++     I   P AN + +
Sbjct: 245  PDEFAQTILRSRPDGGFVRLRDVGRIELGSRSYTSTAKLNNQDTAFLVIYQLPDANALEV 304

Query: 296  AKDVLEMLPELQKNMPSNIEMNVLYDSTVAINESIHEVIKTIVEAALIVLVVITLFLGSL 355
            A+ V  ++ E   + P+ +   VLYD+T  I+ SI EVI T+ +A  +V++V+ LFL + 
Sbjct: 305  AERVKALVEEASVSFPAGVNYTVLYDTTEFISRSISEVIVTLFQAVGLVILVVFLFLQNW 364

Query: 356  RAVLIPIVTIPLSLIGVAMVMQMMGFSWNLMTLLAMVLAIGLVVDDAIVVLENVDRHIKE 415
            RA LIP + IP+SLIG   VM ++G+S N +TL  +VLAIG+VVDDAIVV+ENV+R + E
Sbjct: 365  RATLIPSIAIPVSLIGTFAVMSVLGYSINTITLFGLVLAIGIVVDDAIVVIENVERILAE 424

Query: 416  GESPFRAAII-GTREIAIPVIAMTLTLGAVYAPIALMGGITGSLFKEFALTLAGSVFVSG 474
             + P R A+     E+  PVIA TL L AV+ P+A M GITG L+++F++T++ +V +S 
Sbjct: 425  EKLPIREAVTKAMAEVTGPVIATTLVLLAVFVPVAFMPGITGKLYQQFSVTISVAVIISS 484

Query: 475  IVALTLSPMMCSKML-----KANEAPNKFELKVHHLLDRMTARYERMLTAVMAHRPVV-I 528
            I ALTLSP +C  +L     KA      FE+ +     R T+ Y +++  ++    +V +
Sbjct: 485  INALTLSPALCVALLGRSGDKAIGWLRPFEVAI----TRTTSGYSKLVVQLLRKGALVGV 540

Query: 529  AFAFIVFASLPMLFKFIPSELAPSEDKGVIMLMGTGPSNANLDYLANTMDDVNKILSDQP 588
            A A I+ A    LFK +PS   P ED+G + +    P  A+L+     +  V  ++ + P
Sbjct: 541  ALAVILVAGAG-LFKSVPSAFVPPEDQGFLFVDVQLPDAASLERTEAVLTKVTDMVLEDP 599

Query: 589  EV-QFAQV----FTGVPNSNQAFGIASMVPWSQREASQ---ATVTNRVGTLVQDIPGMAV 640
             V  F  V      G  +SN   GI  +  W +RE +      V  R+ + +  IP   V
Sbjct: 600  AVTDFITVSGFSLLGGASSNNGLGIVMLKDWEEREDASLGLGAVIPRLYSRLWTIPEAQV 659

Query: 641  TAFQMPELPGAG--SGLPIQFVITTPSNFESLFTIATDVLTEVKANPMF--VYSDLDLNF 696
              F  P +PG G  SG   +       +   L  +   ++ E   +     VYS    N 
Sbjct: 660  MVFNPPPIPGLGTSSGFDFRLQDNQGRDVSELAQVMNGLIYEANQSEALSRVYSTYRANI 719

Query: 697  DSATMKINIDKDKAGAYGVTMQDIGITLSTMMADGYVNRIDLNGRSYEVIPQVERKWRLN 756
                ++  ++++KA A G+ + DI  TL T +   YVN     G++Y V+ Q E ++R  
Sbjct: 720  PQYLLE--VERNKAKALGIELSDIFSTLQTQLGSLYVNDFTRFGKNYRVLLQAEGEFRQR 777

Query: 757  PESMNSYYVRAADGKVIPLGSLVTIDVVAEPRSLPHFNQLNSATVGAVPAPGTAMGDAIN 816
            PE ++ Y+VR  DG ++PL +L ++  V  P S+ HFN   S T+    APG A GDAI 
Sbjct: 778  PEDLSHYFVRNRDGDMVPLTTLASLKPVLGPSSIQHFNLKRSVTISGEAAPGFASGDAIA 837

Query: 817  WFENLASSKLPKGYSHDYMGEARQYVTEGSALYATFGLALAIIFLVLAIQFESLRDPLVI 876
              E L+ S LP+GY   + G++ Q +  G+     F LAL  ++L L  Q+ES   P+ +
Sbjct: 838  TMEELSQS-LPQGYEFSWAGQSLQEIQAGNLAGVIFLLALVFVYLFLVAQYESWTLPVAV 896

Query: 877  MVSVPLAICGALIALAWGTATMNIYSQVGLITLVGLITKHGILICEVAKEEQLHNKLSRI 936
            + +VPLA+ GA+  L       NIY+QVGL+ L+GL TK  ILI E A + +  + +S  
Sbjct: 897  LGAVPLALAGAMAGLWLVGLANNIYAQVGLVLLIGLSTKTAILIVEFAMQLR-QSGMSTA 955

Query: 937  EAVMHAAKVRLRPILMTTAAMIAGLIPLMYATGAGAAQRFSIGIVIVSGLAIGTLFTLFV 996
            EA   AA +R R +LMT  + + G++PL++A+GAGAA R S+GI ++SG+   T+    +
Sbjct: 956  EAAQKAAVLRFRAVLMTALSFVLGVLPLVFASGAGAASRVSLGITVLSGMVAATVLGTLL 1015

Query: 997  LPVIYSYL 1004
            +PV Y ++
Sbjct: 1016 VPVFYKWI 1023