Pairwise Alignments

Query, 1036 a.a., multidrug resistance protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1048 a.a., multidrug efflux RND transporter permease subunit from Klebsiella michiganensis M5al

 Score =  516 bits (1328), Expect = e-150
 Identities = 329/1024 (32%), Positives = 544/1024 (53%), Gaps = 32/1024 (3%)

Query: 7    FIKRPVLAVSISFLIVLLGLQAIFKMQVREYPEMTNTVITVSTGYYGASADLIQGFITQP 66
            FI RP+ A  I+ +I+L G  +I K+ + +YP +    I+++  Y GA A+ +Q  +TQ 
Sbjct: 5    FIDRPIFAWVIAIIIMLAGGLSILKLPIAQYPTIAPPAISITAMYPGADAETVQNTVTQV 64

Query: 67   LEQAVAQADNIDFMTSQS-VLGRSTITVTMKLNTDPNAALSDVLAKTNSVRSQLPKEAED 125
            +EQ +   D++ +M+S     G +TIT+T +  TDP+ A   V  K       LP+E + 
Sbjct: 65   IEQNMNGIDHLMYMSSNGDSTGTATITLTFESGTDPDIAQVQVQNKLALATPLLPQEVQQ 124

Query: 126  PTVTMSTGSTTAVLYIGF--TSNELASSQITDYLERVVNPQLYAVNGVSSIDLYGGMKYA 183
              +++   S++ ++ +G   T+  +    I+DY+   +   +   +GV  + L+G  +YA
Sbjct: 125  QGISVEKASSSFLMVVGVINTNGTMNQDDISDYVAANMKDAISRTSGVGDVQLFGS-QYA 183

Query: 184  LRVWLDPAKMAALNLSAADVMSILNANNYQSATGQAIGEFVL----YNGS--ADTQVSTV 237
            +R+W+DP K+    L+  DV+S L A N Q A GQ  G   +     N S  A T+++  
Sbjct: 184  MRIWMDPNKLNNFQLTPVDVISALKAQNAQVAAGQLGGTPPVKGQQLNASIVAQTRLTNT 243

Query: 238  EDLESLVVKAEK-GTVTRLGDIAKVTLAKSHDTYRASANGREAVVAAINAAPSANPINIA 296
            E+  ++++K  + G+  RL D+AK+ L   +    A  NG+ A    I  A  AN ++ A
Sbjct: 244  EEFGNILLKVNQDGSQVRLRDVAKIELGGENYDVIAKFNGQPASGLGIKLATGANALDTA 303

Query: 297  KDVLEMLPELQKNMPSNIEMNVLYDSTVAINESIHEVIKTIVEAALIVLVVITLFLGSLR 356
              +   L +++   PS +++   YD+T  +  SIHEV+KT+VEA ++V +V+ LFL + R
Sbjct: 304  NAIRAELKKMEPFFPSGLKIVYPYDTTPFVQISIHEVVKTLVEAIILVFLVMYLFLQNFR 363

Query: 357  AVLIPIVTIPLSLIGVAMVMQMMGFSWNLMTLLAMVLAIGLVVDDAIVVLENVDRHI-KE 415
            A LIP + +P+ L+G   ++ + GFS N +T+  MVLAIGL+VDDAIVV+ENV+R + +E
Sbjct: 364  ATLIPTIAVPVVLLGTFAILALFGFSINTLTMFGMVLAIGLLVDDAIVVVENVERVMAEE 423

Query: 416  GESPFRAAIIGTREIAIPVIAMTLTLGAVYAPIALMGGITGSLFKEFALTLAGSVFVSGI 475
            G  P  A      +I   ++ + + L AV+ P+A  GG TG+++++F++T+  ++ +S +
Sbjct: 424  GLPPKEATRKSMGQIQGALVGIAMVLSAVFIPMAFFGGSTGAIYRQFSITIVSAMALSVL 483

Query: 476  VALTLSPMMCSKMLK-----ANEAPNKFELKVHHLLDRMTARYERMLTAVMAHRPVVIAF 530
            VAL L+P +C+ MLK     ++ A   F    + + D+ T  Y   +  ++      +  
Sbjct: 484  VALILTPALCATMLKPIQKGSHGATTGFFGWFNRMFDKSTHHYTDSVGNILRSTGRYLVL 543

Query: 531  AFIVFASLPMLFKFIPSELAPSEDKGVIMLMGTGPSNANLDYLANTMDDVNKILSDQPEV 590
              I+   +  LF  +PS   P ED+GV + M   P+ A  +     +D++      + + 
Sbjct: 544  YLIIVVGMAWLFVRLPSSFLPDEDQGVFLSMAQLPAGATQERTQKVLDEMTDYYLTKEKN 603

Query: 591  QFAQVFT----GVPNSNQAFGIA--SMVPWSQREASQ---ATVTNRVGTLVQDIPGMAVT 641
                VF     G     Q  GIA  S+  WSQR   +     +T R       I    V 
Sbjct: 604  NVESVFAVNGFGFAGRGQNTGIAFVSLKDWSQRPGEENKVEAITGRAMGYFSQIKDAMVF 663

Query: 642  AFQMPELP--GAGSGLPIQFVITTPSNFESLFTIATDVLTEVKANPMFVYSDLDLNF--D 697
            AF +P +   G  +G   Q +       E L T A + L  + A    V S +  N   D
Sbjct: 664  AFNLPAIVELGTATGFDFQLIDQAGLGHEKL-TQARNQLFGMVAQHPDVLSGVRPNGLED 722

Query: 698  SATMKINIDKDKAGAYGVTMQDIGITLSTMMADGYVNRIDLNGRSYEVIPQVERKWRLNP 757
            +   K++ID++KA A GV++ DI  TL       YVN     GR  +V    E K+R+ P
Sbjct: 723  TPQFKVDIDQEKAQALGVSISDINTTLGAAWGGSYVNDFIDRGRVKKVYIMSEAKYRMLP 782

Query: 758  ESMNSYYVRAADGKVIPLGSLVTIDVVAEPRSLPHFNQLNSATVGAVPAPGTAMGDAINW 817
            E + ++YVR +DG+++P  +  T         L  +N L S  +     PG + G+A+N 
Sbjct: 783  EDIGNWYVRGSDGQMVPFSAFSTSRWEYGSPRLERYNGLPSMEILGQATPGKSTGEAMNL 842

Query: 818  FENLASSKLPKGYSHDYMGEARQYVTEGSALYATFGLALAIIFLVLAIQFESLRDPLVIM 877
             E LA  KLP G  +D+ G + Q    G+   A + ++L ++FL LA  +ES   P  +M
Sbjct: 843  MEELAG-KLPAGIGYDWTGMSYQERLSGNQAPALYAISLIVVFLCLAALYESWSIPFSVM 901

Query: 878  VSVPLAICGALIALAWGTATMNIYSQVGLITLVGLITKHGILICEVAKEEQLHNKLSRIE 937
            + VPL + GAL+A  +   T ++Y QVGL+T +GL  K+ ILI E AK+         IE
Sbjct: 902  LVVPLGVVGALLAATFRGLTNDVYFQVGLLTTIGLSAKNAILIVEFAKDLMDKEGKGLIE 961

Query: 938  AVMHAAKVRLRPILMTTAAMIAGLIPLMYATGAGAAQRFSIGIVIVSGLAIGTLFTLFVL 997
            A + A ++RLRPILMT+ A I G++PL+ ++GAG+  + ++G  ++ G+   T+  +F +
Sbjct: 962  ATLEAVRMRLRPILMTSLAFILGVMPLVISSGAGSGAQNAVGTGVMGGMVTATVLAIFFV 1021

Query: 998  PVIY 1001
            PV +
Sbjct: 1022 PVFF 1025