Pairwise Alignments

Query, 1036 a.a., multidrug resistance protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1031 a.a., acriflavin resistance protein (RefSeq) from Shewanella sp. ANA-3

 Score =  650 bits (1677), Expect = 0.0
 Identities = 380/1033 (36%), Positives = 600/1033 (58%), Gaps = 18/1033 (1%)

Query: 1    MRFTDVFIKRPVLAVSISFLIVLLGLQAIFKMQVREYPEMTNTVITVSTGYYGASADLIQ 60
            M  TD+ +KRPV A  IS L+V  GL A  K+ +REYP +   ++++ T Y GASA +++
Sbjct: 1    MILTDLSVKRPVFASVISLLLVAFGLVAFDKLPLREYPNIDPPIVSIETNYRGASAAVVE 60

Query: 61   GFITQPLEQAVAQADNIDFMTSQSVLGRSTITVTMKLNTDPNAALSDVLAKTNSVRSQLP 120
              ITQ +E  ++  + I  ++S S  GRS +T+   ++ +   A +DV  + + +   LP
Sbjct: 61   SRITQLIEDRISGVEGIRHVSSSSSDGRSQVTLEFDISRNIEDAANDVRDRISGLLDNLP 120

Query: 121  KEAEDPTVTMSTGSTTAVLYIGFTSNELASSQITDYLERVVNPQLYAVNGVSSIDLYGGM 180
            +EA+ P V  + G    ++++   S+++ + ++TDY  R ++ +L  V+GVS I + GG 
Sbjct: 121  EEADPPEVQKANGGDEVIMWLNLVSDQMTTLELTDYTRRYLSDRLSVVDGVSMIRIGGGK 180

Query: 181  KYALRVWLDPAKMAALNLSAADVMSILNANNYQSATGQAIGEFVLYNGSADTQVSTVEDL 240
             YA+RVWLD   +A+ +L+ ADV + L A N +   G    +   +    +    T ED 
Sbjct: 181  VYAMRVWLDRQALASRSLTVADVEAALRAENVELPAGSLESKERHFTVRLERSYRTAEDF 240

Query: 241  ESLVV-KAEKGTVTRLGDIAKVTLAKSHDTYRASANGREAVVAAINAAPSANPINIAKDV 299
             +LV+ + E G + +LGD+AKV +    +      N    +   ++   +AN + +A+ V
Sbjct: 241  ANLVISQGEDGYLVKLGDVAKVEIGSEEERIMFRGNKEAMIGLGVSKQSTANTLEVARAV 300

Query: 300  LEMLPELQKNMPSNIEMNVLYDSTVAINESIHEVIKTIVEAALIVLVVITLFLGSLRAVL 359
              ++ ++   +P+ + +   YDS+V I  SI EV +T+  A ++V++VI LFLGS+RA+L
Sbjct: 301  NALVDKINPTLPAGMSIKRSYDSSVFIEASIKEVYQTLFTAMVLVIIVIYLFLGSVRAML 360

Query: 360  IPIVTIPLSLIGVAMVMQMMGFSWNLMTLLAMVLAIGLVVDDAIVVLENVDRHIKEGESP 419
            IP +T+P+SL+G  +V+  +G++ NL+TLLAM+LAIG+VVDDAIV+LEN+ R I+EG+SP
Sbjct: 361  IPAITVPVSLLGTFIVLYALGYTINLLTLLAMILAIGMVVDDAIVMLENIHRRIEEGDSP 420

Query: 420  FRAAIIGTREIAIPVIAMTLTLGAVYAPIALMGGITGSLFKEFALTLAGSVFVSGIVALT 479
             +AA +G RE+A  VIA TL L AV+ PI  + G  G LFKEFA+ ++ +V  S IVALT
Sbjct: 421  LKAAFLGAREVAFAVIATTLVLVAVFMPITFLEGDLGKLFKEFAVAMSAAVIFSSIVALT 480

Query: 480  LSPMMCSKMLKANEAPNKFELKVHHLLDRMTARYERMLTAVMAHRPVVIAFAFIVFASLP 539
            LSPMMCSK+LK     +    KV  ++  ++  Y+  L   MA   ++     I   S  
Sbjct: 481  LSPMMCSKLLKPASQDSWLVRKVDSIMTGISRGYQNSLEKAMARPVLMSILVLIALGSSV 540

Query: 540  MLFKFIPSELAPSEDKGVIMLMGTGPSNANLDYLANTMDDV-NKI--LSDQPEVQFAQV- 595
            +L + +P E AP ED+G + LM  GP  A+ +Y+ + M++V N++  L D  +++   + 
Sbjct: 541  LLAQKVPQEFAPQEDRGSLFLMVNGPQGASYEYIESYMNEVENRLMPLVDSGDIKRLLIR 600

Query: 596  ----FTGVPNSNQAFGIASMVPWSQREASQATVTNRVGTLVQDIPGMAVTAFQ-MPELPG 650
                F    + +    I  +  W QR   +  + + +   + D+ G  V AF  M +  G
Sbjct: 601  APRGFGRAADFSNGMAIIVLEDWGQRRPMKEVIGD-INKRLADLAG--VQAFPVMRQAFG 657

Query: 651  AGSGLPIQFVITTPSNFESLFTIATDVLTEVKANPMFVYSDLDLNFDSATMKINIDKDKA 710
             G G P+QFVI  PS +E L      ++ +   NP  +  D D       +++ ID+D+A
Sbjct: 658  RGVGKPVQFVIGGPS-YEELARWRDIMMEKAAENPKLLGLDHDYKETKPQLRVVIDRDRA 716

Query: 711  GAYGVTMQDIGITLSTMMADGYVNRIDLNGRSYEVIPQVERKWRLNPESMNSYYVRAADG 770
             + GV++ +IG TL +M+    V     +G  Y+VI + ER  +     + + YVR+   
Sbjct: 717  ASLGVSISNIGRTLESMLGSRLVTTFMRDGEEYDVIVEGERSNQNTAADLQNIYVRSERT 776

Query: 771  K-VIPLGSLVTIDVVAEPRSLPHFNQLNSATVGAVPAPGTAMGDAINWFENLASSKLPKG 829
            K +IPL +LVT++  A+  SL  +N++ + T+ A  A G ++G+A+++   +A + LP  
Sbjct: 777  KELIPLSNLVTVEEFADASSLNRYNRMRAITIEASLADGYSLGEALDYLNQVARAYLPAE 836

Query: 830  YSHDYMGEARQYVTEGSALYATFGLALAIIFLVLAIQFESLRDPLVIMVSVPLAICGALI 889
                Y G++  Y   GS++Y  F LAL I+FLVLA QFES   P+VIM++VPLA  GALI
Sbjct: 837  AVISYKGQSLDYQESGSSMYFVFLLALGIVFLVLAAQFESYIHPMVIMLTVPLATVGALI 896

Query: 890  ALAWGTATMNIYSQVGLITLVGLITKHGILICEVAKEEQLHNK-LSRIEAVMHAAKVRLR 948
             L +   ++NIYSQ+G+I LVGL  K+GILI E A   QL +K +    A++ A+  RLR
Sbjct: 897  GLWFTGQSLNIYSQIGIIMLVGLAAKNGILIVEFA--NQLRDKGVDFDRAIIQASCQRLR 954

Query: 949  PILMTTAAMIAGLIPLMYATGAGAAQRFSIGIVIVSGLAIGTLFTLFVLPVIYSYLAEKH 1008
            PILMT     AG +PL+ A GAGA  RF IG+V++SG+ + TLFT+FV+P  Y   A   
Sbjct: 955  PILMTGITTAAGAVPLVLAAGAGAETRFVIGVVVLSGIMLATLFTIFVIPTAYGLFARNS 1014

Query: 1009 KPLPVFVEDKDLE 1021
                   +  D E
Sbjct: 1015 GSPEAIAQQLDKE 1027