Pairwise Alignments

Query, 1036 a.a., multidrug resistance protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1051 a.a., acriflavin resistance protein (RefSeq) from Shewanella sp. ANA-3

 Score =  588 bits (1517), Expect = e-172
 Identities = 361/1044 (34%), Positives = 572/1044 (54%), Gaps = 24/1044 (2%)

Query: 1    MRFTDVFIKRPVLAVSISFLIVLLGLQAIFKMQVREYPEMTNTVITVSTGYYGASADLIQ 60
            M  +DV +KRPV+A+ +S L+ + GL +  K+ VRE P++ + V+TVST Y GASA +++
Sbjct: 1    MWLSDVSVKRPVVAIVLSLLLCVFGLVSFTKLSVREMPDVESPVVTVSTSYSGASAAIME 60

Query: 61   GFITQPLEQAVAQADNIDFMTSQSVLGRSTITVTMKLNTDPNAALSDVLAKTNSVRSQLP 120
              IT+ LE  +     ID +TS +  G S ITV   L  +    +SDV       + +LP
Sbjct: 61   SQITKTLEDELTGISGIDEITSTTRNGSSRITVKFLLGWNLTEGVSDVRDAVARAQRRLP 120

Query: 121  KEAEDPTVTMSTGSTTAVLYIGFTSNELASSQITDYLERVVNPQLYAVNGVSSIDLYGGM 180
            ++A DP V+   GS    +Y+  +S+ +  +Q+TDY +RV+  +   ++GVSSI + GG+
Sbjct: 121  EDANDPVVSKDNGSGEPSVYVNLSSSVMDRTQLTDYAQRVLEDRFSLISGVSSISISGGL 180

Query: 181  KYALRVWLDPAKMAALNLSAADVMSILNANNYQSATGQAIGEFVLYNGSADTQVSTVEDL 240
               + V L P +MA  N++  D+++ L   N ++  GQ   +  + +        T +D 
Sbjct: 181  YKVMYVKLRPEQMAGRNVTVTDIINALRKENVETPGGQVRNDTTVMSVRTKRLYYTPKDF 240

Query: 241  ESLVVK-AEKGTVTRLGDIAKVTLAKSHDTYRASANGREAVVAAINAAPSANPINIAKDV 299
            + LVV+ A  GT   L D+A V +   ++     ++G   +   +     ANP+ +A++V
Sbjct: 241  DYLVVRTASDGTPIYLKDVADVAVGAQNENSTFKSDGIVNLSLGVITQSDANPLIVAQEV 300

Query: 300  LEMLPELQKNMPSNIEMNVLYDSTVAINESIHEVIKTIVEAALIVLVVITLFLGSLRAVL 359
             + +  +Q  +P    + V +DSTV I+ SI+EV  T+     +V++V+ +F+G  RA L
Sbjct: 301  HKEVDRIQDFLPEGTSLVVDFDSTVFIDRSINEVYNTLYVTGALVVLVLYIFIGQARATL 360

Query: 360  IPIVTIPLSLIGVAMVMQMMGFSWNLMTLLAMVLAIGLVVDDAIVVLENVDRHIKEGESP 419
            IP VT+P+SLI   +   M G+S NL+TL+A++LAIGLVVDDAIVV+EN+  HI+ GE P
Sbjct: 361  IPAVTVPVSLISAFIAANMFGYSINLLTLMALILAIGLVVDDAIVVVENIFHHIERGEEP 420

Query: 420  FRAAIIGTREIAIPVIAMTLTLGAVYAPIALMGGITGSLFKEFALTLAGSVFVSGIVALT 479
              AA  GTRE+   V+A T  L  V+ PI+ M G+ G LF EF++ LA SV  S ++ALT
Sbjct: 421  LLAAYKGTREVGFAVVATTAVLVMVFLPISFMEGMVGLLFTEFSVMLAVSVLFSSLIALT 480

Query: 480  LSPMMCSKMLKANEAPNKFELKVHHLLDRMTARYERMLTAVMAHRPVVIAFAFIVFASLP 539
            L+P++ SK+LKAN  PN+F   V     RM   Y   +T  +  + +             
Sbjct: 481  LTPVLSSKLLKANVKPNRFNRFVDSGFARMEKVYRVGVTQAIRFKWLAPLVILACVGGSA 540

Query: 540  MLFKFIPSELAPSEDKGVIMLMGTGPSNANLDYLANTMDDVNKILSD--------QPEVQ 591
             L + +PS+LAP ED+GV+     G    + + +   MD V   L             VQ
Sbjct: 541  WLMQQVPSQLAPQEDRGVLFAFVKGAEGTSYNRMTANMDIVEDRLMPLLGQGVLRSFSVQ 600

Query: 592  FAQVFTGVPNSNQAFGIASMVPWSQREASQATVTNRVGTLVQDIPGMAVTAFQMPELPG- 650
             A  F G       F I  +  W  R  +       +   ++DIP + V     P +PG 
Sbjct: 601  -APAFGGRAGDQTGFVIMQLEDWEHRHVTAQQALGIISNALKDIPDVMV----RPMMPGF 655

Query: 651  -AGSGLPIQFVITTPSNFESLFTIATDVLTEVKANPMFVYSDLDLNFDSATMKINIDKDK 709
               S  P+QFV+   S++  LF  A  +  E  A+PM   +DLD    +  + + +DK++
Sbjct: 656  RGQSSEPVQFVL-GGSDYAELFKWAQVLKEEANASPMMEGADLDYAETTPELIVTVDKER 714

Query: 710  AGAYGVTMQDIGITLSTMMADGYVNRIDLNGRSYEVIPQVERKWRLNPESMNSYYVRAAD 769
            A   G+++ ++  TL  M+           G  Y+V  + +     N   ++  Y+R+A 
Sbjct: 715  AAELGISVDEVSQTLEVMLGGRKETTYVDRGEEYDVYLRGDENSFNNVGDLSQIYMRSAK 774

Query: 770  GKVIPLGSLVTIDVVAEPRSLPHFNQLNSATVGAVPAPGTAMGDAINWFENLASSKLPKG 829
            G+++ L +L  I+ VA  + L H N+  S T+ A  + G  +G+A+ + +N A   LPK 
Sbjct: 775  GELVTLDTLTHIEEVASAQKLSHTNKQKSITLKANISKGYTLGEALKFLDNKAIELLPKD 834

Query: 830  YSHDYMGEARQYVTEGSALYATFGLALAIIFLVLAIQFESLRDPLVIMVSVPLAICGALI 889
             S  Y GE++ +    S++   FGLAL + +LVLA QFES  +PLV+M +VP+ + G  +
Sbjct: 835  ISIGYTGESKDFKENQSSILIVFGLALLVAYLVLAAQFESFINPLVVMFTVPMGVFGGFL 894

Query: 890  ALAWGTATMNIYSQVGLITLVGLITKHGILICEVAKEEQLHNK-LSRIEAVMHAAKVRLR 948
             L   +  +NIYSQ+G+I L+G++TK+GILI E A   QL ++ L+  +A++ A+  RLR
Sbjct: 895  GLLVTSQGINIYSQIGMIMLIGMVTKNGILIVEFA--NQLRDRGLALDKAIIDASTRRLR 952

Query: 949  PILMTTAAMIAGLIPLMYATGAGAAQRFSIGIVIVSGLAIGTLFTLFVLPVIYSYL-AEK 1007
            PILMT    + G +PL++++GAG+  R ++G V+  G+A  T  TLFV+P +Y  + A  
Sbjct: 953  PILMTAFTTLVGAVPLIFSSGAGSESRIAVGTVVFFGMAFATFVTLFVIPAMYRLISAAT 1012

Query: 1008 HKPLPVFVEDKDLEKLARIDEAKA 1031
            H   P +VE K LE   +  E  A
Sbjct: 1013 HS--PGYVEAK-LEAAIKAQELAA 1033