Pairwise Alignments

Query, 298 a.a., HTH-type transcriptional activator IlvY from Vibrio cholerae E7946 ATCC 55056

Subject, 313 a.a., LysR family transcriptional regulator PA5437 from Pseudomonas fluorescens FW300-N2E2

 Score = 87.8 bits (216), Expect = 3e-22
 Identities = 65/241 (26%), Positives = 114/241 (47%), Gaps = 4/241 (1%)

Query: 1   MNIKTLQLFMHLCDCKNFSKTASAMHLSPSALSRQIQKLEQDLGHTLFLRDNRSVELTPA 60
           M ++ LQ+F  +CD +++S+ A  M L+  A+S QI+ LE+ +G  LF    + + +T A
Sbjct: 1   MTLRQLQIFNEVCDLRSYSRAADEMSLTQPAVSLQIRSLEELIGQPLFEYVGKKLYMTEA 60

Query: 61  AHQLLPVAARIIHDWRQFTTELNDDSQELRGEIKLFCSVTASYSHLPELLSSFRLKHPYI 120
           A  L   +  I         +L+D    L+G++KL    +A Y  +P L ++F+ +HP +
Sbjct: 61  AEALQRASRDIFGRLENLDMQLSDMQGSLQGQLKLAVESSAKY-FVPHLFAAFKRQHPEV 119

Query: 121 EFKLLTGDPAQAIDKILHDEADIAISAMPEQLPSRIEFATISEIPLSVIAPLGIS-SFMD 179
              L   +  Q I ++  +  D+ I +M  Q    +EF      P+  +AP       M 
Sbjct: 120 NLNLTVVNRGQVIRRLSDNRDDLVIMSMVPQ-DMGLEFLPFLNNPIVAVAPPDHPLCHMG 178

Query: 180 ELQKEQPDWNEIPFIVPESGTARDRANTWFKQMKIKPNIYAQIAGHEAIVSLVALGCGVG 239
            L+ +  +   +    P SGT R     +FK+ ++      ++A  EA    V  G GV 
Sbjct: 179 PLRLQDLEPYTLLLREPGSGT-RLACEEYFKEKRVHFTQTLEVASAEAQRECVVAGLGVA 237

Query: 240 I 240
           +
Sbjct: 238 L 238