Pairwise Alignments

Query, 298 a.a., HTH-type transcriptional activator IlvY from Vibrio cholerae E7946 ATCC 55056

Subject, 288 a.a., Transcriptional regulators, LysR family from Pseudomonas fluorescens FW300-N2E2

 Score = 86.3 bits (212), Expect = 8e-22
 Identities = 63/243 (25%), Positives = 116/243 (47%), Gaps = 9/243 (3%)

Query: 1   MNIKTLQLFMHLCDCKNFSKTASAMHLSPSALSRQIQKLEQDLGHTLFLRDNRSVELTPA 60
           M +  L++F  +CD  + ++ A  +H  PS ++ +++ LE++LG  LF R+ R + ++PA
Sbjct: 1   MELSQLRMFKTVCDTGSIARAAEVLHCVPSNITARLKSLERELGTPLFFREGRGLRVSPA 60

Query: 61  AHQLLPVAARIIHDWRQFTTELNDDSQELRGEIKLFCSVTASYSHLPELLSSFRLKHPYI 120
               L  A +I+    +    +N  S    G +++    +++   LP+LL+ +  ++P +
Sbjct: 61  GEVFLGYATKILGLTEEARRAVN-PSHTPSGPLRIGAIESSATGRLPQLLAKYHAQYPQV 119

Query: 121 EFKLLTGDPAQAIDKILHDEADIAISAMPEQLPSRIEFATISEIPLSVIAPLGISSFMDE 180
             +L TG  AQ +D   H   D  I A+  + P  ++ A +    L +IA    S     
Sbjct: 120 SLELSTGTWAQLLDDTQHHRLDGVIVAVDVERPG-LKRAVMYREDLMLIA----SESHGP 174

Query: 181 LQKEQPDWNEIPFIVPESGTARDRANTW-FKQMKIKPNIYAQIAGHEAIVSLVALGCGVG 239
           L+       +  F+ P     R     W  +  +++P I   IA + AIV  V+ G GV 
Sbjct: 175 LRNAADLQGKAIFMWPPGCPYRFALEQWLLRHDQVQPII--SIASYGAIVGCVSAGAGVS 232

Query: 240 IAP 242
           + P
Sbjct: 233 LVP 235