Pairwise Alignments

Query, 298 a.a., HTH-type transcriptional activator IlvY from Vibrio cholerae E7946 ATCC 55056

Subject, 319 a.a., Transcriptional regulator from Pseudomonas stutzeri RCH2

 Score = 87.0 bits (214), Expect = 5e-22
 Identities = 74/300 (24%), Positives = 137/300 (45%), Gaps = 9/300 (3%)

Query: 1   MNIKTLQLFMHLCDCKNFSKTASAMHLSPSALSRQIQKLEQDLGHTLFLRDNRSVELTPA 60
           M ++ LQ+F  +C+  ++S+ A  M L+  A+S QI++LE+ +G  LF    + + LT A
Sbjct: 8   MTLRQLQVFRAVCETLSYSRAAEEMALTQPAVSLQIRQLEELVGQPLFEYVGKKLYLTDA 67

Query: 61  AHQLLPVAARIIHDWRQFTTELNDDSQELRGEIKLFCSVTASYSHLPELLSSFRLKHPYI 120
           A  L   +  I         +L+D    L+G++ L    +A Y   P L ++F+  HP +
Sbjct: 68  ADALQRASTDIFGRLDSLDMQLSDLQGSLQGQLNLAVESSAKYV-TPHLFAAFKRLHPEV 126

Query: 121 EFKLLTGDPAQAIDKILHDEADIAI-SAMPEQLPSRIEFATISEIPLSVIAPLGISSFMD 179
             +L+  + AQA+ ++     D+ I S +P  +   +EF      P+  +AP G      
Sbjct: 127 SLQLVVVNHAQAVKRLSVSRDDLLIMSQVPTDMD--LEFMPFLNNPIIAVAPPG-HPLCH 183

Query: 180 ELQKEQPDWNEIPFIVPESGTARDRA-NTWFKQMKIKPNIYAQIAGHEAIVSLVALGCGV 238
                  D    P +V E G+   RA   + +Q +       Q+A  +A+   V  G G+
Sbjct: 184 AATLSLQDLTGYPLLVREPGSGTRRAGEDYLRQKRAHFAQTIQVASLDALRECVVAGLGL 243

Query: 239 GIAPDVVINNSPVRDKIQRLSVTPIKPFMLGVCC--KRSQLDNPLVQALWRVVSAKKSVV 296
            + P   ++       ++ L V  + P     C    RS+  +P+ QA +  +  +++ +
Sbjct: 244 ALLPRHAVHLELASGLLRELPVAEL-PLYRSWCVVHPRSKRLSPVAQAFFTFLREERAQI 302