Pairwise Alignments

Query, 298 a.a., HTH-type transcriptional activator IlvY from Vibrio cholerae E7946 ATCC 55056

Subject, 291 a.a., Transcriptional regulator from Pseudomonas stutzeri RCH2

 Score = 87.4 bits (215), Expect = 3e-22
 Identities = 72/266 (27%), Positives = 119/266 (44%), Gaps = 10/266 (3%)

Query: 1   MNIKTLQLFMHLCDCKNFSKTASAMHLSPSALSRQIQKLEQDLGHTLFLRDNRSVELTPA 60
           M++  L  F+ + +   FS  A  +HL+  A+S++I  LE  L   LF R  R + LT A
Sbjct: 1   MDLANLNAFIAVAETGGFSLAAERLHLTQPAVSKRIAALESQLDVRLFDRLGREIGLTEA 60

Query: 61  AHQLLPVAARIIH---DWRQFTTELNDDSQELRGEIKLFCSVTASYSHLPELLSSFRLKH 117
              LLP A +I++   D R+  T LN D   + G + L  S       LP LL +F   H
Sbjct: 61  GRALLPRAYQILNVLDDTRRALTNLNGD---IGGRLSLATSHHIGLHRLPPLLRAFTRAH 117

Query: 118 PYIEFKLLTGDPAQAIDKILHDEADIAISAMPEQLPSRIEFATISEIPLS-VIAPLGISS 176
           P +   +   D   A D++LH  A++A+  +  Q    +    + + PL  V+AP    +
Sbjct: 118 PQVSLDIRFLDSEVAYDEVLHGRAELAVITLAPQTAEPVRAVKVWDDPLDFVVAPEHPLA 177

Query: 177 FMDELQKEQPDWNEIPFIVPESGT-ARDRANTWFKQMKIKPNIYAQIAGHEAIVSLVALG 235
              ++Q    D    P + P   T     A   F++  + PNI       E I  +V++G
Sbjct: 178 SKTDIQ--LADIAGHPAVFPGGNTFTHHIAQRLFEREGLTPNITMSTNYMETIKMMVSIG 235

Query: 236 CGVGIAPDVVINNSPVRDKIQRLSVT 261
               + P  +++   V   +  + +T
Sbjct: 236 IAWSVLPRSMLDEQVVSLPLPGIQLT 261