Pairwise Alignments

Query, 298 a.a., HTH-type transcriptional activator IlvY from Vibrio cholerae E7946 ATCC 55056

Subject, 316 a.a., transcriptional regulator, LysR family from Pseudomonas syringae pv. syringae B728a

 Score = 92.4 bits (228), Expect = 1e-23
 Identities = 66/244 (27%), Positives = 122/244 (50%), Gaps = 10/244 (4%)

Query: 1   MNIKTLQLFMHLCDCKNFSKTASAMHLSPSALSRQIQKLEQDLGHTLFLRDNRSVELTPA 60
           M ++ L++F  +CD +++S+ A  M L+  A+S QI++LE+ +G  LF   ++ + LT A
Sbjct: 8   MTLRQLRIFNEVCDLRSYSRAAEEMSLTQPAVSLQIRQLEELIGQPLFEYVSKKLYLTEA 67

Query: 61  AHQLLPVAARIIHDWRQFTTELNDDSQELRGEIKLFCSVTASYSHLPELLSSFRLKHPYI 120
           A  L   +  I         +L+D    L+G++KL    +  Y  +P L ++F+ +HP +
Sbjct: 68  AQALQQASRDIFGRLESLDMQLSDMQGSLQGQLKLAVESSCKY-FIPHLFAAFKRQHPEV 126

Query: 121 EFKLLTGDPAQAIDKILHDEADIAI-SAMPEQLPSRIEFATISEIPLSVIAPLG--ISSF 177
              L+  + AQ I ++  +  D+ + SA+P  L   +EF      P+  +AP    +SS 
Sbjct: 127 SLSLMVVNRAQVIRRLADNRDDLVVMSAVP--LDMGLEFLPFLNNPIVAVAPPDHPLSSR 184

Query: 178 MDELQKEQPDWNEIPFIVPESGTARDRA-NTWFKQMKIKPNIYAQIAGHEAIVSLVALGC 236
                K+   W   P +  E+G+   RA   +FK+ ++      +++  EA    V  G 
Sbjct: 185 ATLNLKDLEPW---PLLTRETGSGTRRACEEFFKEKRVHFTQTLEVSSSEAQRECVVAGL 241

Query: 237 GVGI 240
           G+ +
Sbjct: 242 GLAM 245