Pairwise Alignments

Query, 298 a.a., HTH-type transcriptional activator IlvY from Vibrio cholerae E7946 ATCC 55056

Subject, 292 a.a., DNA-binding transcriptional regulator IlvY (RefSeq) from Shewanella amazonensis SB2B

 Score =  285 bits (728), Expect = 1e-81
 Identities = 138/285 (48%), Positives = 195/285 (68%), Gaps = 1/285 (0%)

Query: 1   MNIKTLQLFMHLCDCKNFSKTASAMHLSPSALSRQIQKLEQDLGHTLFLRDNRSVELTPA 60
           M+I+ ++LF++LCD   F++TA  MH+SPS LSR +Q+LE++ G  LF RDNRSV LT A
Sbjct: 1   MDIREIKLFLNLCDTLQFARTAEQMHVSPSTLSRAMQRLEEEAGTRLFERDNRSVSLTSA 60

Query: 61  AHQLLPVAARIIHDWRQFTTELNDDSQELRGEIKLFCSVTASYSHLPELLSSFRLKHPYI 120
             +    A  +++ W Q  + ++ +  +L+G + L+CSVTA+YSHLP+LL  FR +HP +
Sbjct: 61  GVEFRRFAQDMMNSWEQLVSRIDPNQLQLKGRLNLYCSVTAAYSHLPKLLDRFRREHPLV 120

Query: 121 EFKLLTGDPAQAIDKILHDEADIAISAMPEQLPSRIEFATISEIPLSVIAPLGISSFMDE 180
           E  L TGD A A+ ++  + ADIAI+A+PE  P  + F+ I  IPLS+IAP       + 
Sbjct: 121 EIVLNTGDAANAVGEVQQNRADIAIAALPEPFPDNLHFSPIETIPLSIIAPQVACRAREL 180

Query: 181 LQKEQPDWNEIPFIVPESGTARDRANTWFKQMKIKPNIYAQIAGHEAIVSLVALGCGVGI 240
           L +E   W+++PFI+PE G  R RA+ WFK M I  NIYA+++GHEAI+S+VALGCGV I
Sbjct: 181 LGEETVPWDKLPFIIPEHGPGRRRADAWFKAMGINANIYAKVSGHEAIISMVALGCGVSI 240

Query: 241 APDVVINNSPVRDKIQRL-SVTPIKPFMLGVCCKRSQLDNPLVQA 284
            P+VVI +SPVRD+I  + S   I PF LG CCK  + D+PL+ A
Sbjct: 241 TPEVVIQHSPVRDRIALIPSPVAIAPFELGCCCKTKRRDDPLIAA 285