Pairwise Alignments

Query, 298 a.a., HTH-type transcriptional activator IlvY from Vibrio cholerae E7946 ATCC 55056

Subject, 296 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score = 83.6 bits (205), Expect = 5e-21
 Identities = 76/290 (26%), Positives = 134/290 (46%), Gaps = 16/290 (5%)

Query: 3   IKTLQLFMHLCDCKNFSKTASAMHLSPSALSRQIQKLEQDLGHTLFLRDNRSVELTPAAH 62
           IKTL  F+ L +  NF++ A    ++   LS+ IQ+LE++LG  L  R+N+ +ELT A  
Sbjct: 5   IKTLHYFLTLVETGNFTRAAEKSFITQPTLSKIIQRLEENLGQQLLHRNNQKIELTQAGI 64

Query: 63  QLLPVAARIIHDWRQFTTELNDDSQELRGEIKL-FCSVTASYSHLPELLSSFRLKHPYIE 121
            L   A  I+  W +   +L + S    G ++L  C + +S   + +LL++FR ++P IE
Sbjct: 65  LLENSAREILGQWHRLQEDLTNLSGLKSGHLRLGVCPMMSSL--IIDLLTAFRQQYPGIE 122

Query: 122 FKLLTGDPAQAIDKILHDEADIAISAMPEQLPSRIEFATISEIPLSVIAPLGISSFMDEL 181
            ++           +L++  DIA +A+P      +    ++  PL    P   +    E 
Sbjct: 123 LQMYEYGGFGCEQALLNNSLDIAFTALPTTHDIELANRALTRYPLLACLPKDHALAQQEA 182

Query: 182 QKEQPDWNEIPFIVPESGTARDRANTWFK-QMKIKPNIYAQIAGHEAIVSLVALGCGVGI 240
              Q D+   PFI+     +  +  T    +  ++ NI  +    + + ++V    GV I
Sbjct: 183 VTWQ-DFEAYPFILYNEDFSLAKLITRLSHKAGVQLNIAFRSGQWDFLATMVEAQMGVAI 241

Query: 241 APDVVINNSPVRDKIQ--RLSVTPIKPFM---LGVCCKRSQLDNPLVQAL 285
            P+      P+  K+Q   L   PI+P +   L +  ++     P  QAL
Sbjct: 242 LPE------PICHKLQGSELVFKPIRPNLTWDLALIWRKDLPLTPAAQAL 285