Pairwise Alignments

Query, 298 a.a., HTH-type transcriptional activator IlvY from Vibrio cholerae E7946 ATCC 55056

Subject, 294 a.a., DNA-binding transcriptional regulator IlvY (RefSeq) from Shewanella loihica PV-4

 Score =  270 bits (691), Expect = 2e-77
 Identities = 133/292 (45%), Positives = 193/292 (66%), Gaps = 1/292 (0%)

Query: 1   MNIKTLQLFMHLCDCKNFSKTASAMHLSPSALSRQIQKLEQDLGHTLFLRDNRSVELTPA 60
           M+I+T++L++HL +  +F++TA  MH+SPS LSR +Q+LE+++G  LF RDNRSV LT A
Sbjct: 1   MDIRTIKLYLHLSNSLHFARTAQQMHVSPSTLSRAMQRLEEEVGAKLFERDNRSVTLTNA 60

Query: 61  AHQLLPVAARIIHDWRQFTTELNDDSQELRGEIKLFCSVTASYSHLPELLSSFRLKHPYI 120
             +    A + + +W +    L+     LRG + ++CSVTA+YSHLP LL  FR +HP +
Sbjct: 61  GVEYRHFAEQTLDNWSKLKHRLDPKQDLLRGRLNIYCSVTAAYSHLPALLDRFRNEHPLV 120

Query: 121 EFKLLTGDPAQAIDKILHDEADIAISAMPEQLPSRIEFATISEIPLSVIAPLGISSFMDE 180
           E  L TGD A A++ +  + ADI+I+A PE LP  + F  I  +PL +IAP    +  + 
Sbjct: 121 EIALTTGDAANAVEMVRQNRADISIAAKPESLPESLHFIKIDNVPLVIIAPTFKCAVQEL 180

Query: 181 LQKEQPDWNEIPFIVPESGTARDRANTWFKQMKIKPNIYAQIAGHEAIVSLVALGCGVGI 240
           L +    W+ +PFI+PE G  R R   WFKQ+ +  N+YAQ++G EAI S+VALGCGV I
Sbjct: 181 LTEPYIPWDRLPFILPEHGPGRLRIENWFKQLGLSANVYAQVSGQEAIASMVALGCGVSI 240

Query: 241 APDVVINNSPVRDKIQRL-SVTPIKPFMLGVCCKRSQLDNPLVQALWRVVSA 291
            P+VVI NSPV+D+IQ+L S   I PF LG C K+S+ D P++ A  + ++A
Sbjct: 241 TPEVVIQNSPVKDRIQQLSSPVAIPPFELGCCSKKSREDEPVIAAFVKELNA 292