Pairwise Alignments

Query, 298 a.a., HTH-type transcriptional activator IlvY from Vibrio cholerae E7946 ATCC 55056

Subject, 295 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella sp. ANA-3

 Score = 89.7 bits (221), Expect = 7e-23
 Identities = 69/269 (25%), Positives = 130/269 (48%), Gaps = 13/269 (4%)

Query: 3   IKTLQLFMHLCDCKNFSKTASAMHLSPSALSRQIQKLEQDLGHTLFLRDNRSVELTPAAH 62
           IKTLQ F+ L + +NF++ A    ++   LS+ IQ+LE+ LG TL +R+N+ VELT A  
Sbjct: 5   IKTLQCFLTLVETENFTRAAEKCFITQPTLSKIIQRLEESLGETLLIRNNQKVELTQAGQ 64

Query: 63  QLLPVAARIIHDWRQFTTELNDDSQELRGEIKL-FCSVTASYSHLPELLSSFRLKHPYIE 121
                A  I+  W +   ++++ S    G ++L  C + +S   +  LL+S+R ++P +E
Sbjct: 65  LFEHSAREILGQWHRLQEDMSNLSGLKTGRLRLGVCPMMSSL--IIGLLTSYRKRYPGVE 122

Query: 122 FKLLTGDPAQAIDKILHDEADIAISAMPEQLPSRIEFATISEIPLSVIAPLGISSFMDEL 181
            ++           +L++  DIA +A+P    + +    +++ PL    P G      + 
Sbjct: 123 LQMYEYGGFGCEQALLNNSLDIAFTALPTTHETELVNQPLTKYPLLACLPDG-HPLASQS 181

Query: 182 QKEQPDWNEIPFIV-PESGTARDRANTWFKQMKIKPNIYAQIAGHEAIVSLVALGCGVGI 240
                D+   PFI+  E  +     N   ++  ++ NI  +    + + ++V    G+ I
Sbjct: 182 HLSWQDFEPYPFILYNEDFSLAKLINRLSRKAGVQLNIAFRSGQWDFLAAMVEADMGLAI 241

Query: 241 APDVVINNSPVRDKI--QRLSVTPIKPFM 267
            P+      P+  K+   +L   P++P M
Sbjct: 242 LPE------PICQKLSTSKLVFRPMQPAM 264