Pairwise Alignments

Query, 298 a.a., HTH-type transcriptional activator IlvY from Vibrio cholerae E7946 ATCC 55056

Subject, 290 a.a., DNA-binding transcriptional regulator IlvY (RefSeq) from Shewanella sp. ANA-3

 Score =  304 bits (779), Expect = 1e-87
 Identities = 146/290 (50%), Positives = 201/290 (69%), Gaps = 1/290 (0%)

Query: 1   MNIKTLQLFMHLCDCKNFSKTASAMHLSPSALSRQIQKLEQDLGHTLFLRDNRSVELTPA 60
           M+I+TL+L++HLCD  +F+KTA  MH+SPS LSR +Q+LE+++   LF RDNRSV LT A
Sbjct: 1   MDIRTLKLYLHLCDSLHFAKTAEQMHVSPSTLSRALQRLEEEVNAKLFERDNRSVTLTHA 60

Query: 61  AHQLLPVAARIIHDWRQFTTELNDDSQELRGEIKLFCSVTASYSHLPELLSSFRLKHPYI 120
             +    A + +H WR     ++     LRG + L+CSVTA+YSHLP+LL  FR +HP++
Sbjct: 61  GREFKLFAEQTLHHWRNLRHSIDLKQDVLRGTLNLYCSVTAAYSHLPQLLERFRQEHPFV 120

Query: 121 EFKLLTGDPAQAIDKILHDEADIAISAMPEQLPSRIEFATISEIPLSVIAPLGISSFMDE 180
           E  L TGD A A+ ++  + ADIAI+A+P+  P+ + FA I ++PLS+IAP    +   +
Sbjct: 121 EIALTTGDAANALAEVQQNRADIAIAALPDPFPATLHFAKIDDVPLSLIAPTMRCAVQQQ 180

Query: 181 LQKEQPDWNEIPFIVPESGTARDRANTWFKQMKIKPNIYAQIAGHEAIVSLVALGCGVGI 240
           + +   DW+ +PFI+P+ G  R RA+ WFKQM I PNIYAQ++G EAI S+VALGCGV I
Sbjct: 181 ISQAPIDWSRVPFIIPDHGPGRRRADNWFKQMGISPNIYAQVSGQEAIASMVALGCGVSI 240

Query: 241 APDVVINNSPVRDKIQRL-SVTPIKPFMLGVCCKRSQLDNPLVQALWRVV 289
            P+VVINNSPVRD+IQ L S   I PF LG CCK  +LD+P+V A    +
Sbjct: 241 TPEVVINNSPVRDRIQLLASPVNIAPFELGCCCKVKRLDDPIVNAFLEAI 290