Pairwise Alignments

Query, 265 a.a., glutamate racemase from Vibrio cholerae E7946 ATCC 55056

Subject, 280 a.a., glutamate racemase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 91.3 bits (225), Expect = 2e-23
 Identities = 67/234 (28%), Positives = 118/234 (50%), Gaps = 20/234 (8%)

Query: 11  IFDSGVGGLSVYREIEARLPQLNYIYLFDNAAYPYGELTQETLIARVDTLVTRMVEQERI 70
           +FDSG GGL++  +I   LP+ +Y+YL DNA  PYG  + E +       V ++ E    
Sbjct: 14  VFDSGYGGLTILNKIREALPEYDYVYLGDNARTPYGTRSFEIVYEFTLQAVNKLFEM-GC 72

Query: 71  DLVVIACNTASTIVLPVLRAKLTIP-------VVGVV-PAIK-PASLIASKAIGLIATPA 121
            LV++ACNTAS   L  ++    +P       V+GV+ P ++    +  S+ IG++AT  
Sbjct: 73  HLVILACNTASAKALRSIQMN-DLPGIDPERRVLGVIRPTVECIGGITQSRHIGVLATAG 131

Query: 122 TVKRQ-YTQELIRDFSANKNVELLGS-----TRLVNMAEEKLRGKPLDLEELASILQPLK 175
           T+K + Y  E+ + F    ++++ G        LV   E +  G    + +    L    
Sbjct: 132 TIKSESYPLEIHKLF---PDIQVSGMACPMWVPLVENNESQNEGADYFIRKYIDQLLSKD 188

Query: 176 NTIDVAVLGCTHFPLIKEEIQQVLGEQVQLIDSGLAIARRVQELLGIEQAVGAK 229
             ID  +LGCTH+P++  +IQ+   + ++++  G  +A  +++ L     + AK
Sbjct: 189 PEIDTMILGCTHYPILLPKIQEYTPKHIRIVAQGEYVAESLKDYLSRHPEMNAK 242