Pairwise Alignments

Query, 535 a.a., alkaline serine protease from Vibrio cholerae E7946 ATCC 55056

Subject, 1038 a.a., Outer membrane autotransporter barrel from Pseudomonas syringae pv. syringae B728a

 Score = 62.0 bits (149), Expect = 1e-13
 Identities = 85/358 (23%), Positives = 124/358 (34%), Gaps = 102/358 (28%)

Query: 135 SASANAAQDNVTWGIDRIDQRDLPLNRSYNYNYDGSGVTAYVIDTGIAFNHPEFGGRAK- 193
           +AS  +A+ N  WG+  I+      +++Y   Y G  +   + D  +   HPEF    K 
Sbjct: 54  AASWRSAEFNADWGLGAINA-----DQAYAAGYSGKDIKLGIFDQPVYAPHPEFDSPNKV 108

Query: 194 -----SG------------------YDFIDNDNDASDCQGHGTHVAGTIGGAQYGVAKNV 230
                SG                  YD   + +       HGTHV G  GG + G   + 
Sbjct: 109 VNLVTSGIREYTDPYIPVKAGDAFRYDGAPSLDSGGKLGNHGTHVGGIAGGNRDGGPMHG 168

Query: 231 NLVGVRVLGCDGS--GSTEAIARGID-------WVAQNASGPSVANLSLGGGISQAMD-- 279
                +++  D    G  + I  G D       W A   SG  V N S G GI+   D  
Sbjct: 169 VAYNAQIISADNGDPGPEDGIVLGNDGAVYQAGWNALVNSGARVINNSWGIGITDRFDKG 228

Query: 280 ---------------------------------QAVARLVQRGVTAVIAAGND----NKD 302
                                            Q      + GV  + AAGND    N D
Sbjct: 229 GRDPAFPHFTVQDAQVQFDQIRQILGTRPGGAYQGAIDAARSGVVTIFAAGNDYNLNNPD 288

Query: 303 AC----QVSPAREPSGITVGSTTNNDGR----------SNFSNWGNCVQIF---APGSDV 345
           A        P   P+ +TV +   N             S FS+       F   APG+ +
Sbjct: 289 AMAGLGYFVPDIAPNWLTVAALQQNPDAAAAATTPYTLSTFSSRCGYTASFCVSAPGTRI 348

Query: 346 TSASHKG--------GTTTMSGTSMASPHVAGVAALYLQENKNLSPNQIKTLLSDRST 395
            S+   G        G    +GTSMA+PHVAG  A+ ++    ++  Q+  +L   +T
Sbjct: 349 YSSVLNGTSLADLTVGWANKNGTSMAAPHVAGSMAVLMERFPYMTGAQVADVLKTTAT 406