Pairwise Alignments

Query, 535 a.a., alkaline serine protease from Vibrio cholerae E7946 ATCC 55056

Subject, 1300 a.a., serine protease, subtilase family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 47.0 bits (110), Expect = 4e-09
 Identities = 29/65 (44%), Positives = 39/65 (60%), Gaps = 12/65 (18%)

Query: 338 IFAPGSDVTSA-------SHKGGT-----TTMSGTSMASPHVAGVAALYLQENKNLSPNQ 385
           + APG+D+ +A         K GT     T MSGTSMASPHVAG  AL    +K+ +P+Q
Sbjct: 622 VAAPGTDIYAAYADQQFGHDKTGTDPADFTLMSGTSMASPHVAGAGALLKSLHKDWTPDQ 681

Query: 386 IKTLL 390
           I++ L
Sbjct: 682 IRSAL 686



 Score = 38.1 bits (87), Expect = 2e-06
 Identities = 62/294 (21%), Positives = 98/294 (33%), Gaps = 98/294 (33%)

Query: 88  LEIKNVFDSALSGFSAELTAEQLQALRADPNVDYIEQNQIITVNPIISASANAAQDNVTW 147
           +E    +  AL+G +  +T  Q   +   P+V +IE+ +I  +   +S S   +     W
Sbjct: 144 IEALTTYQYALNGMAIRMTQAQAIKMAELPDVVFIERERIEQLETDVSQSLIGSPK--IW 201

Query: 148 GIDRIDQRDLPLNRSYNYNYDGSGVTAYVIDTGIAFNHPEFGGRAKSGYD---------- 197
                  + +           G GV   +ID+GI  +H  F      GYD          
Sbjct: 202 DGSATGTKAM-----------GEGVIVGIIDSGINSDHASFADIGGDGYDHSNPLGQGIY 250

Query: 198 ------------------------FIDNDNDA------------SDCQGHGTHVAGTIGG 221
                                     +N +DA             D  GHG+HVA T  G
Sbjct: 251 IGDCKTDFTSMCNDKLIGVRSYSEITNNYDDAKVFGDKPPAKNGEDYGGHGSHVASTAAG 310

Query: 222 ---------------------------AQY-GVAKNVNLVGVRVLGCDGSGSTEA----- 248
                                      AQ  GVA + N++  ++     +G T +     
Sbjct: 311 NILLNVPYVQGEAGKLEAEGIPTDIKFAQISGVAPHANIIAYQICNPGNAGDTYSGCPTA 370

Query: 249 -IARGIDWVAQNASGPSVANLSLGGG---ISQAMDQAVARLVQRGVTAVIAAGN 298
            I + ID   ++  G  V N S+ GG    + A +Q        G+   +AAGN
Sbjct: 371 PILKAIDDSIKD--GVDVLNFSISGGGNPWNSATEQGFLAARNAGIFTAVAAGN 422