Pairwise Alignments

Query, 611 a.a., vitamin B12 transporter BtuB from Vibrio cholerae E7946 ATCC 55056

Subject, 682 a.a., TonB-dependent receptor (NCBI) from Rhodospirillum rubrum S1H

 Score =  144 bits (364), Expect = 9e-39
 Identities = 168/648 (25%), Positives = 270/648 (41%), Gaps = 80/648 (12%)

Query: 22  ANEAQPQETVVVTANRFEQKASSTLADVEIITRQDIEQTQAKTLPELLRRLTGVQITQNG 81
           A+E +  E ++V+A+R    A      V ++T +D+ +   + + + LR+L GV +++ G
Sbjct: 57  ADEPETTEGLIVSASRTPVAAKDLGRSVSVLTGEDLRERGVRYVSDALRQLPGVAVSRAG 116

Query: 82  GRGQLASLFVRGTSSDQVLVLVDGIRFARAAKGAVDFNQIPLTYVDRIEYVRGARASLYG 141
           G G +  + +RG  ++ VLVL+DG+  +  A G  DF  +  + ++RIE +RG +++L+G
Sbjct: 117 GPGGVTQVRLRGAEANHVLVLIDGVAVSSPASGEYDFAGLVASDIERIEVLRGPQSALWG 176

Query: 142 SEAIGGVINIITKARSQ-QQGTTVSAGLGSLDYQELSIASGVAIGEKGQMNVALGTESDK 200
           S A  GVI+I+T+  ++ Q G  VS   GS      S+A G    E     ++L      
Sbjct: 177 SNATAGVISIVTRRGTRNQSGGEVSLDGGSDGTFGGSVAMGAGT-EDLDAALSLAGLRAG 235

Query: 201 GYNVRPVPGVNDGDRHGFRSDNALLGYVHQFDESWSLF-ANARAYENIYQYDN-SYGT-- 256
           G +V   PG  D DR     +  L G ++     W  F A AR  +    YD  ++G   
Sbjct: 236 GLDVSADPG-GDIDRD---RNITLNGKINYDASDWLRFGATARMADRRSDYDGFAFGAPK 291

Query: 257 -------RDYKEAEKDDLSFTIGTQYQSERWVSELQLTTQKQKSWDYT----QSKGKYSD 305
                   DY   ++D               V  L      Q  +DYT    Q+      
Sbjct: 292 RSDLVYDGDYATDQRD-------VAVSGHVDVDSLGGRLSHQARFDYTRVDIQTLLDGLS 344

Query: 306 TSDNLEQRNIQWINRYLVNDVWT-------FAGGVDWRDESYIDKTADKEFDRSNTAA-- 356
           T+ +L QR        L  D  T           VDW+ E++ +  AD   D S      
Sbjct: 345 TAKSLGQRFKGTYQTTLALDAPTLTSANHRLTAAVDWQRETFRNTDADLVSDPSQVEGQQ 404

Query: 357 ---FAVVA----AEWQQWLLEASLRFDDNQEYGSQTTHNIALGYQFIP-EFGVKASYGSA 408
              + +VA      +Q   L+A+LR D N  +   TT + +  Y+  P +  + AS G+ 
Sbjct: 405 RDLYGLVAEYRGTLFQDLDLQAALRHDINDSFADSTTFSTSASYEVRPTQSRLHASVGTG 464

Query: 409 FKAPNLYQQYD--PS--YGNVNLQPEDADSAELSFYGLFSGIKWSITGYDYKINNLIDYN 464
              P  Y+Q+   PS   GN NL PE         +G  +GI+  I G    ++    + 
Sbjct: 465 VTNPTFYEQFGFIPSQFIGNANLDPE-------KNFGWDAGIEQRILGDQLTLDATYFHE 517

Query: 465 STTKNYQNVI-------------GESNIKGVEFTAEF----ATGIVQHQLSVDLKDADDS 507
           + T     V              G+S  +G+E T       A  +  +    D  D DD 
Sbjct: 518 TLTDEIVTVYKAPSYLGTAVNENGDSRRQGIELTLTARPTEALTLTGNYTWTDAYDPDD- 576

Query: 508 KGKTLQRRAEHMYKWNALVAF--EQVDWSIGYQYVGKRPDLDYN--TYPTQNITLDAYSL 563
             K   RR  H     A   F   +   +    Y     D DY   +  +  + LD Y+L
Sbjct: 577 --KIEVRRPRHRATLAADYRFLDNRAGVNAEVVYAAGNYDFDYRAASMGSARLRLDDYAL 634

Query: 564 VDTSVSYYVTDSTTISARIDNLLDKEYETANGYPAAERAYYLNIGYQF 611
           ++    Y VT++  +  RI+N LD +Y   +GY       Y  +  +F
Sbjct: 635 LNLGGRYKVTEAVEVYGRIENALDTQYADLDGYATQGVTGYFGLRARF 682