Pairwise Alignments

Query, 611 a.a., vitamin B12 transporter BtuB from Vibrio cholerae E7946 ATCC 55056

Subject, 656 a.a., TonB-dependent receptor (RefSeq) from Shewanella loihica PV-4

 Score = 89.7 bits (221), Expect = 3e-22
 Identities = 74/252 (29%), Positives = 109/252 (43%), Gaps = 22/252 (8%)

Query: 2   QKSALAIALASLLT---PISYLHANEAQPQETVVVTANRFEQKASSTLADVEIITRQDIE 58
           Q S +A+ L + L    P     +    P +  +    R E    +  A+V +I    IE
Sbjct: 4   QPSKIALLLGACLAGSFPALAESSGTPGPVDETITVIGRTENTPINIAANVNVIDAAAIE 63

Query: 59  QTQAKTLPELLRRLTGVQITQNGGRGQLASLFVRGTSSDQV----LVLVDGIRFARAAKG 114
            + A  L ELLR  +G+Q++ +      A   +RG S+ Q     L+L+DG R       
Sbjct: 64  LSGATNLTELLRGQSGIQVSDSNSGAVFA---MRGFSASQAVNNTLILIDGRRLNNIDIA 120

Query: 115 AVDFNQIPLTYVDRIEYVRGARASLYGSEAIGGVINIITKARSQQQGTTVSAGLGSLDYQ 174
           A   + I L  V+RIE + G+   LYG +A+GGVINIITKA     G+   +G GS D  
Sbjct: 121 APSISAIGLNQVERIEILSGSAGVLYGDQAVGGVINIITKAPKDNGGSLQLSG-GSFDTF 179

Query: 175 ELSIASGVAIGEKGQMNVALGTESDKGYNVRPVPGVNDGDRHGFRSDNALLGYVHQFDES 234
           E      VAI +  ++  A        Y             H     +++LG +   DE 
Sbjct: 180 EAKAEGSVAINDNWRLYGAANHLKSDNYR-----------DHNASKTSSVLGRLQYDDEV 228

Query: 235 WSLFANARAYEN 246
               A A  Y+N
Sbjct: 229 QQFLAEASHYDN 240



 Score = 40.8 bits (94), Expect = 2e-07
 Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 9/66 (13%)

Query: 554 QNITLDAYSLVDTSVSYYVTDSTTISARIDNLLDKEYET--------ANGYPAAERAYYL 605
           Q   LDAY+L + +++Y   D+   S R+DNLLDKEY +        +  YP   RA  L
Sbjct: 592 QGDKLDAYTLANIAINYS-RDAWLASLRVDNLLDKEYVSSGYFSTWGSGYYPGTGRALRL 650

Query: 606 NIGYQF 611
              Y+F
Sbjct: 651 TASYRF 656