Pairwise Alignments

Query, 611 a.a., vitamin B12 transporter BtuB from Vibrio cholerae E7946 ATCC 55056

Subject, 857 a.a., TonB-dependent receptor (RefSeq) from Shewanella loihica PV-4

 Score = 78.2 bits (191), Expect = 1e-18
 Identities = 66/212 (31%), Positives = 104/212 (49%), Gaps = 28/212 (13%)

Query: 4   SALAIALASLLTPISYLHANEAQPQETVVVTANRFEQKASSTLADVEIITRQDIEQTQAK 63
           SA AIA+   LTP  Y  A+E    E + VT +R ++      + ++ I + DI      
Sbjct: 9   SACAIAITIALTPHVYA-ADEGV--ERIEVTGSRIKRTDIEGPSPIQSINKDDIANMGFD 65

Query: 64  TLPELLRRL--TGVQITQNGGRGQ------LASLFVRGTSSDQVLVLVDGIRFARAA--- 112
            L +LL R+   G       G  Q       AS+ +RG   D  LVL++G R A ++   
Sbjct: 66  NLQQLLERMPANGAGAFSTRGNSQDSTANGAASISLRGMGPDATLVLINGRRVAISSFAE 125

Query: 113 ---KGAVDFNQIPLTYVDRIEYVRGARASLYGSEAIGGVINIITKARSQQQGTTVSAGLG 169
                 VD N IP++ ++RI+ ++   +++YGS+AI GV+NII   R   +G  ++ G G
Sbjct: 126 GITNSFVDINNIPVSAIERIDILKDGASAIYGSDAIAGVVNII--LRKNFEGIEINLGYG 183

Query: 170 SLDYQELSIASGVAIGEKGQMNVALGTESDKG 201
                    ASG +  E+   ++  G +SDKG
Sbjct: 184 E--------ASGSSYDEQSG-SMLWGMQSDKG 206



 Score = 38.1 bits (87), Expect = 2e-06
 Identities = 43/211 (20%), Positives = 83/211 (39%), Gaps = 32/211 (15%)

Query: 224 LLGYVHQFDESWSLFANARAYENIYQYDNSYG--TRDYKEAEKDDLSFT-IGTQYQSERW 280
           L G + ++D  W + A     E+  + D + G    D+ +AE D  ++   G    S+  
Sbjct: 376 LRGNIDEWD--WEVSAQKGRSESTQKGDRTQGWVRTDFLQAEIDAGNYNPFGGTMNSQDV 433

Query: 281 VSELQLTTQKQKSWDYTQSKGKYSDTSDNLEQRNIQWINRYLVNDVWTFAGGVDWRDESY 340
           +  +  +  +Q     T      +  +  L  R +              A GV++R+E  
Sbjct: 434 IDRITTSLVRQGVSHLTAYDASITGPAFTLADREVM------------MAAGVEYREEDV 481

Query: 341 IDKTADK--------------EFDRSNTAAFAVVAAE-WQQWLLEASLRFDDNQEYGSQT 385
            D   D+              + DR   AA+   +      + L+ + R+D   ++GS T
Sbjct: 482 SDVPDDQFQRGLIFGTEAVSAQADRDQYAAYVEFSIPVTDSFELQLAGRYDHYSDFGSTT 541

Query: 386 THNIALGYQFIPEFGVKASYGSAFKAPNLYQ 416
              +A  +    +   +AS+ + F+AP+L Q
Sbjct: 542 NPKVAFQWGISDQLTARASWATGFRAPSLAQ 572