Pairwise Alignments

Query, 611 a.a., vitamin B12 transporter BtuB from Vibrio cholerae E7946 ATCC 55056

Subject, 836 a.a., TonB-dependent receptor (RefSeq) from Shewanella loihica PV-4

 Score = 77.4 bits (189), Expect = 2e-18
 Identities = 49/165 (29%), Positives = 89/165 (53%), Gaps = 14/165 (8%)

Query: 4   SALAIALASLLTPISYLHAN------EAQPQETVVVTANRFEQKASSTLADVEIITRQDI 57
           +A+ ++L + ++   Y  AN      E+   E + VT +R +++   T + V +I    I
Sbjct: 9   AAVKLSLIATVSTSGYFVANNAVAAEESASFERIAVTGSRIQRQDMETASPVTVIDASAI 68

Query: 58  EQTQAKTLPELLRR---LTGVQI--TQNGGRGQLASLFVRGTSSDQVLVLVDGIRFARAA 112
                 ++ E+L+    + G+ +  T N G   +A + +RG  + + LVL++G R   + 
Sbjct: 69  RAEGYNSVDEILQAQPAMAGMAVGSTTNNGADGVAQVDLRGMGASRTLVLLNGRRMVNSG 128

Query: 113 KGA---VDFNQIPLTYVDRIEYVRGARASLYGSEAIGGVINIITK 154
            GA   VD N IP+  + R+E ++   +++YGS+AI GV+NIITK
Sbjct: 129 SGADSAVDLNTIPVAMIARVEILKDGASAVYGSDAIAGVVNIITK 173



 Score = 44.3 bits (103), Expect = 2e-08
 Identities = 66/286 (23%), Positives = 114/286 (39%), Gaps = 72/286 (25%)

Query: 370 EASLRFDDNQEYGSQTTHNIALGYQFIPEFGVKASYGSAFKAPNL----------YQQYD 419
           E +LRFDD   +G+ +T  I L Y+   +  ++A   + F+APN+          Y   D
Sbjct: 525 EFALRFDDYSTFGNASTWKIGLTYEATDDLMLRAVAATGFRAPNVSELFGGNVGSYDYLD 584

Query: 420 PSYGN-------VNLQPE---DADSAELSFYGL------FSGIKWSITGYDYKINNLID- 462
             +GN       VN   +    A+S+E    GL        G+  ++  + +KI + I  
Sbjct: 585 DPWGNEQDPQILVNYTSDPDLKAESSESYTAGLVYSPSYIDGMSLTLDYWRFKIKDAISR 644

Query: 463 -----------YNSTTK----------NYQNV------IGESNIKGVEFTAEFA-TGI-V 493
                         TT           N +N+      +G  +  G++F   +   G+ +
Sbjct: 645 LDVQAGLNACHAGDTTACETFGITPDGNLENLTNPLTNVGYQDTSGIDFNLAYRFEGLGL 704

Query: 494 QHQLSVDL-------KDADDSKGKTLQRRAEH-MYKWNALVAFEQVDWSIGY--QYVGKR 543
              +S DL       +D  D  G        +   K N  V   Q DWS+ Y  +++G+ 
Sbjct: 705 DWSISNDLTYLLEFEQDGIDYTGTIGGMFGGYAKVKNNFSVKAGQGDWSLMYSNRFIGEM 764

Query: 544 PDLDYNTYPTQNITLDAYSLVDTSVSYYVTDSTTISARIDNLLDKE 589
            D++Y        T+D+    + S  Y++ DS T S  + N  D++
Sbjct: 765 DDINYGD------TVDSVLYHNISGMYHINDSITASLGVKNFTDEK 804