Pairwise Alignments

Query, 611 a.a., vitamin B12 transporter BtuB from Vibrio cholerae E7946 ATCC 55056

Subject, 861 a.a., TonB-dependent receptor (RefSeq) from Shewanella sp. ANA-3

 Score = 85.9 bits (211), Expect = 7e-21
 Identities = 77/255 (30%), Positives = 116/255 (45%), Gaps = 36/255 (14%)

Query: 4   SALAIALASLLTP-ISYLHANEAQPQETVVVTANRFEQKASSTLADVEIITRQDIEQTQA 62
           SA AIA+A    P ISY   N A   E + VT +R ++      + ++ I ++DI     
Sbjct: 9   SACAIAIAMAFAPSISYAADNGADKVERIEVTGSRIKRTDIEGPSPIQSIGKEDIANMGF 68

Query: 63  KTLPELLRRL------------TGVQITQNGGRGQLASLFVRGTSSDQVLVLVDGIRFAR 110
             L +LL R+                 T NGG    AS+ +RG   D  LVL++G R A 
Sbjct: 69  DNLQQLLERMPANGAGAFSTRGNSQDSTANGG----ASISLRGLGPDATLVLINGRRVAA 124

Query: 111 AA------KGAVDFNQIPLTYVDRIEYVRGARASLYGSEAIGGVINIITKARSQQQGTTV 164
           +A         VD N IP++ ++RI+ ++   +++YGS+AI GV+NI+ K     +G  V
Sbjct: 125 SAFAEGITNSFVDINNIPVSAIERIDILKDGASAIYGSDAIAGVVNIVLK--KDIEGIEV 182

Query: 165 SAGLG-----SLDYQELSIASGVAIGEKGQMNVALGTESDKGYNVRPVP--GVNDGDRHG 217
           + G G       D    S+  GV   EKG  +V L    +   +   +   G  D   +G
Sbjct: 183 NLGYGDTPGTGYDETTASVVWGVK-SEKGSASVILDYFKNDTLSATDLGRFGTADQSPYG 241

Query: 218 ---FRSDNALLGYVH 229
              FRS     GY +
Sbjct: 242 GEDFRSSRGFPGYFY 256



 Score = 40.4 bits (93), Expect = 3e-07
 Identities = 48/212 (22%), Positives = 82/212 (38%), Gaps = 34/212 (16%)

Query: 224 LLGYVHQFDESWSLFANARAYENIYQYDNSYG--TRDYKEAEKDDLSFT-IGTQYQSERW 280
           L G + ++D  W         E+    D + G    DY +AE D   +   G    S+  
Sbjct: 380 LRGTIKEWD--WEASVQRGRSESTQTGDRTQGWVRTDYLQAEIDAGRYNPFGGTMNSQDV 437

Query: 281 VSELQLTTQKQKSWDYTQSKGKYSDTSDNLEQRNIQWINRYLVNDVWTFAGGVDWRDESY 340
           +  +  +  +Q     T      S  +  L  R+I              A GV++R+ES 
Sbjct: 438 IDAITTSLVRQGLSSMTSYAANISGQAFTLADRDIM------------MAAGVEYREESV 485

Query: 341 IDKTADKEFDRS---NTAAFAVVAAEWQ-------------QWLLEASLRFDDNQEYGSQ 384
            D   D++F R     T A +  A+  Q              + L+ + R+D   ++GS 
Sbjct: 486 SD-VPDEQFQRGLIFGTEAVSAAASRDQYAGYVEFSIPVTDNFELQLAGRYDHYSDFGST 544

Query: 385 TTHNIALGYQFIPEFGVKASYGSAFKAPNLYQ 416
           T   +A  +    E   + S+ + F+AP+L Q
Sbjct: 545 TNPKVAFQWGITDELTSRGSWSTGFRAPSLAQ 576



 Score = 29.3 bits (64), Expect = 7e-04
 Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 7/69 (10%)

Query: 534 SIGYQYVGK---RPDLDYNTY----PTQNITLDAYSLVDTSVSYYVTDSTTISARIDNLL 586
           ++   Y+G+    PD+D++        ++  +DA  LVD S SY   +   ++  ++NL 
Sbjct: 764 NVNLSYIGEFEDTPDIDFDGVLDFETNKSRMVDAQLLVDMSGSYRFNEMFKLTLGVNNLF 823

Query: 587 DKEYETANG 595
           D+E   A G
Sbjct: 824 DEEPPFAIG 832