Pairwise Alignments

Query, 369 a.a., tRNA (uridine(54)-C5)-methyltransferase TrmA from Vibrio cholerae E7946 ATCC 55056

Subject, 361 a.a., tRNA (uracil-5-)-methyltransferase from Pseudomonas syringae pv. syringae B728a

 Score =  363 bits (931), Expect = e-105
 Identities = 185/363 (50%), Positives = 244/363 (67%), Gaps = 8/363 (2%)

Query: 7   NPELYQAQLADKIARLKAMFVDYSMPELEVFESPVANYRMRAEFRIWHEGDDMYYIMFNQ 66
           +P  Y  QL +K  RL+ +   +  PE +VF+SP  +YR+RAEFR+W E    YY MF  
Sbjct: 6   DPASYDRQLEEKTVRLRELLAPFDAPEPQVFDSPREHYRLRAEFRLWREDQKRYYAMFAP 65

Query: 67  -ETREKYRVDQFPAASRLINDLMPLLMDAMKGSPILRHKLFQVDFLSTLSGEILVSLLYH 125
            + R    ++  P AS  IN LMP+L +  + SP L HKLFQVDFL+TL+G+ +++L YH
Sbjct: 66  GDNRTPILLEGLPIASERINALMPVLRERWEASPTLNHKLFQVDFLTTLAGDAMITLCYH 125

Query: 126 RQLSEEWITAAQALKQRLNDEGFNLNLIGRARKMKVVLDRDYVVENLQVNGQPYVYKQVE 185
           R L  EW  AA  L   L+     ++LIGR++  K+V+  DYV E L V G+ + Y+Q E
Sbjct: 126 RPLDAEWQAAAAQLAAELD-----VSLIGRSKGQKLVIGHDYVTEKLDVAGRTFSYRQPE 180

Query: 186 NSFTQPNAKVAEKMLEWAVDCTQESKGDLLELYCGNGNFSLALAQNFERVLATELAKPSV 245
            +FTQPN  V  KML WA D   E + DLLELYCGNGNF+L LA    +VLATE++K SV
Sbjct: 181 GAFTQPNGTVNGKMLNWAFDALGERQDDLLELYCGNGNFTLPLATRVRKVLATEISKTSV 240

Query: 246 EAAQFNIAANQIGNVQIIRMSAEEFTQAMEGKREFNRLKDAGVDLQSYRCNTIFVDPPRS 305
            AA  N+  N + NV ++R+SAEE T+A+   R F RL   GVDL+SY   ++FVDPPR+
Sbjct: 241 NAALSNLDDNGVDNVTLVRLSAEELTEALNEVRPFRRLH--GVDLKSYDFGSVFVDPPRA 298

Query: 306 GMDIDTCKMVQGYERILYISCNPETLQENLQVLGETHQVVRFALFDQFPYTHHMEAGVML 365
           GMD DTC++ + +ERILYISCNPETL  N+  L +TH+V R ALFDQFPYTHHME+GV+L
Sbjct: 299 GMDPDTCELTRRFERILYISCNPETLAANIAQLHDTHRVERCALFDQFPYTHHMESGVLL 358

Query: 366 ERK 368
            R+
Sbjct: 359 VRR 361