Pairwise Alignments

Query, 369 a.a., tRNA (uridine(54)-C5)-methyltransferase TrmA from Vibrio cholerae E7946 ATCC 55056

Subject, 415 a.a., RNA methyltransferase from Sinorhizobium meliloti 1021

 Score = 54.3 bits (129), Expect = 6e-12
 Identities = 56/220 (25%), Positives = 104/220 (47%), Gaps = 20/220 (9%)

Query: 152 LIGRARKMKVVLDRDYVVENLQ--VNGQPYVYKQVENSFTQPNAKVAEKMLEWAVDCTQE 209
           ++G     +V L+ + VVE L+  ++           +FTQ      + M +  +    +
Sbjct: 212 VLGERGIARVSLNGEIVVEPLKPAIDFDGVTVSPPPGAFTQATRPAEDAMAKLVLAHVGK 271

Query: 210 SKGDLLELYCGNGNFSLALAQNFERVLATELAKPSVEAAQFNIAANQIGNVQIIRMSAEE 269
           +K  + +L+ G G F+L +A+   RV A E    +V+A  F  AA    N Q ++    E
Sbjct: 272 AKR-VADLFAGIGTFALRIART-ARVHAVEGDDRAVKALDF--AAR---NTQGLKPVTAE 324

Query: 270 FTQAMEGKREFNRLKDAGVDLQSYRCNTIFVDPPRSGMDIDTCKMVQ-GYERILYISCNP 328
                  KR+  R      +L+++  + +  DPPR+G +    ++ + G ++I  +SCNP
Sbjct: 325 -------KRDLFRRPMMAQELKAF--DAVVFDPPRAGAETQCHELARSGVKKIAAVSCNP 375

Query: 329 ETLQENLQVL-GETHQVVRFALFDQFPYTHHMEAGVMLER 367
            TL  +L +L    +++      DQF ++ H+E    LE+
Sbjct: 376 VTLARDLSILTAAGYRITGVTPIDQFLWSAHVETVATLEK 415