Pairwise Alignments

Query, 369 a.a., tRNA (uridine(54)-C5)-methyltransferase TrmA from Vibrio cholerae E7946 ATCC 55056

Subject, 443 a.a., 23S rRNA 5-methyluridine methyltransferase (RefSeq) from Shewanella amazonensis SB2B

 Score = 73.9 bits (180), Expect = 8e-18
 Identities = 53/184 (28%), Positives = 88/184 (47%), Gaps = 20/184 (10%)

Query: 187 SFTQPNAKVAEKMLEWAVDCTQESKGD-LLELYCGNGNFSLALAQNFERVLATELAKPSV 245
           +F Q N +V + M+  A++      G+ +L+L+CG GNFSL LA+    V+  E     V
Sbjct: 273 NFIQVNGEVNQAMVAQAMNWLDVHAGERVLDLFCGVGNFSLPLAKQGAEVVGVEGVPEMV 332

Query: 246 EAAQFNIAANQIGNVQIIRMSAEEFTQAMEGKREFNRLKDAGVDLQSYRCNTIFVDPPRS 305
             A+ N A N + N+        E               D   +    + + + +DP R+
Sbjct: 333 AQAKQNAAINGLDNLSFYCADLSE---------------DLAAEPWLGKIDKLLLDPARA 377

Query: 306 GMDIDTCKMVQGYE--RILYISCNPETLQENLQVLGET-HQVVRFALFDQFPYTHHMEAG 362
           G   ++ K ++  +  ++LY+SCNP +L  +  +L E  +Q+ R  L D FP THH E  
Sbjct: 378 GA-YESLKWLKKMKPAKVLYVSCNPASLARDSVLLFEAGYQLTRLGLVDMFPQTHHSEGM 436

Query: 363 VMLE 366
            + E
Sbjct: 437 ALFE 440