Pairwise Alignments

Query, 369 a.a., tRNA (uridine(54)-C5)-methyltransferase TrmA from Vibrio cholerae E7946 ATCC 55056

Subject, 415 a.a., putative RNA methyltransferase from Phaeobacter inhibens DSM 17395

 Score = 46.2 bits (108), Expect = 2e-09
 Identities = 44/178 (24%), Positives = 78/178 (43%), Gaps = 18/178 (10%)

Query: 187 SFTQPNAKVAEKMLEWAVDCTQESKGDLLELYCGNGNFSLALAQNFERVLATELAKPSVE 246
           +F Q        +L    DC   +K  +++L+ G G F+L LA+N E          +VE
Sbjct: 243 AFLQATRDGEAALLAAVKDCVVGAKR-IVDLFAGCGTFTLPLAKNAE--------VHAVE 293

Query: 247 AAQFNIAANQIGNVQIIRMSAEEFTQAMEGKREFNRLKDAGVDLQSYRC--NTIFVDPPR 304
                + A   G  Q     A+   +     R+  R      DL  +    +   +DPPR
Sbjct: 294 GESSMLRALDAGWRQ-----AKGLKKVTTETRDLFRNPLLAEDLNPFGAAFDVAVIDPPR 348

Query: 305 SGMDIDTCKMVQGY-ERILYISCNPETLQENLQVLGE-THQVVRFALFDQFPYTHHME 360
           +G +    ++V    +R+ Y+SCNP T   + ++L +  +++    + DQF ++ H E
Sbjct: 349 AGAEAQVTQLVTARTKRVAYVSCNPVTFARDAKILTDGGYRLDWVQVVDQFRWSSHCE 406