Pairwise Alignments

Query, 369 a.a., tRNA (uridine(54)-C5)-methyltransferase TrmA from Vibrio cholerae E7946 ATCC 55056

Subject, 362 a.a., tRNA (uracil-5-)-methyltransferase from Dechlorosoma suillum PS

 Score =  360 bits (924), Expect = e-104
 Identities = 181/364 (49%), Positives = 256/364 (70%), Gaps = 8/364 (2%)

Query: 6   VNPELYQAQLADKIARLKAMFVDYSMPELEVFESPVANYRMRAEFRIWHEGDDMYYIMFN 65
           +NP  Y A LA+K+AR +A F  + +PE  +  S   +YR+RAEF+I      + Y MFN
Sbjct: 6   INPAAYDALLAEKLARYRADFAPFDLPEPHIARSAPLHYRLRAEFQIVRREGQVAYAMFN 65

Query: 66  QET-REKYRVDQFPAASRLINDLMPLLMDAMKGSPILRHKLFQVDFLSTLSGEILVSLLY 124
            +  RE   ++ FP AS  I ++MP L D ++ S +L+  LF+VDFLSTLSGE+LV+L+Y
Sbjct: 66  PDNPREAVPLETFPVASATICEMMPRLRDELQASELLKDYLFRVDFLSTLSGELLVTLVY 125

Query: 125 HRQLSEEWITAAQALKQRLNDEGFNLNLIGRARKMKVVLDRDYVVENLQVNGQPYVYKQV 184
            R L   W  AA+ L QRLN     + LIGR+R  K+VL RD+V E+ ++ G+   Y+Q+
Sbjct: 126 KRPLRPLWEAAARDLAQRLN-----IQLIGRSRGQKLVLGRDWVEESFELEGRQLRYQQI 180

Query: 185 ENSFTQPNAKVAEKMLEWAVDCTQESKGDLLELYCGNGNFSLALAQNFERVLATELAKPS 244
           E +F+QPN +V  +ML WA        GDLLELYCGNGNF++ALA ++ERVLATE++K S
Sbjct: 181 EGAFSQPNGEVNRQMLAWACAQAATLGGDLLELYCGNGNFTIALAPHYERVLATEMSKTS 240

Query: 245 VEAAQFNIAANQIGNVQIIRMSAEEFTQAMEGKREFNRLKDAGVDLQSYRCNTIFVDPPR 304
           V AAQ+N+ AN++ NV+++R+SAEEF++A  G +EF RL  AG+DL+ YR +T+FVDPPR
Sbjct: 241 VHAAQYNLEANRVDNVKVVRISAEEFSEAYSGTKEFTRL--AGIDLKGYRFSTVFVDPPR 298

Query: 305 SGMDIDTCKMVQGYERILYISCNPETLQENLQVLGETHQVVRFALFDQFPYTHHMEAGVM 364
           +G+D  T  +V+G++ ILYISCNPETL+ N+  L +TH++   A FDQFPYT H+E G++
Sbjct: 299 AGLDDGTLALVRGFDHILYISCNPETLKANVAALHDTHRIAAAAAFDQFPYTDHLECGLL 358

Query: 365 LERK 368
           L R+
Sbjct: 359 LSRR 362