Pairwise Alignments

Query, 369 a.a., tRNA (uridine(54)-C5)-methyltransferase TrmA from Vibrio cholerae E7946 ATCC 55056

Subject, 366 a.a., tRNA (uridine(54)-C5)-methyltransferase TrmA from Klebsiella michiganensis M5al

 Score =  484 bits (1246), Expect = e-141
 Identities = 229/360 (63%), Positives = 293/360 (81%), Gaps = 2/360 (0%)

Query: 9   ELYQAQLADKIARLKAMFVDYSMPELEVFESPVANYRMRAEFRIWHEGDDMYYIMFNQET 68
           E Y+AQLA+K+ RL+ M   +S    EVF SP+++YRMRAEFR+WH+GDD+Y+IMF+Q+T
Sbjct: 9   EQYEAQLAEKVVRLQKMMAPFSAQVPEVFRSPISHYRMRAEFRLWHDGDDLYHIMFDQQT 68

Query: 69  REKYRVDQFPAASRLINDLMPLLMDAMKGSPILRHKLFQVDFLSTLSGEILVSLLYHRQL 128
           + + RVD FPAAS LIN LM  +++ ++ +P+LRHKLFQVD+L+TLS + ++SLLYH++L
Sbjct: 69  KSRIRVDTFPAASELINQLMAAVIEGVRDNPVLRHKLFQVDYLTTLSNQAVISLLYHKKL 128

Query: 129 SEEWITAAQALKQRLNDEGFNLNLIGRARKMKVVLDRDYVVENLQVNGQPYVYKQVENSF 188
            +EW   A+  +  L  +  N++LIGRA K K+ LD+DY+ E L V G+  +Y+QVENSF
Sbjct: 129 DDEWRQQAERFRDALRAQNLNVHLIGRATKTKIELDQDYIDERLPVGGREMIYRQVENSF 188

Query: 189 TQPNAKVAEKMLEWAVDCTQESKGDLLELYCGNGNFSLALAQNFERVLATELAKPSVEAA 248
           TQPNA +  +MLEWA+D T+++ GDLLELYCGNGNFSLALA+NFERVLATE+AKPSV AA
Sbjct: 189 TQPNAAMNVQMLEWAIDATKDATGDLLELYCGNGNFSLALARNFERVLATEIAKPSVAAA 248

Query: 249 QFNIAANQIGNVQIIRMSAEEFTQAMEGKREFNRLKDAGVDLQSYRCNTIFVDPPRSGMD 308
           Q+NIAAN I NVQIIRMSAEEFTQAM G R+FNRL+D  +DL+SY+C TIFVDPPRSG+D
Sbjct: 249 QYNIAANHIDNVQIIRMSAEEFTQAMNGVRQFNRLQD--IDLKSYQCETIFVDPPRSGLD 306

Query: 309 IDTCKMVQGYERILYISCNPETLQENLQVLGETHQVVRFALFDQFPYTHHMEAGVMLERK 368
            +T KMVQ Y RILYISCNPETL +NL+ L ETH++ R ALFDQFPYTHHME GV+L +K
Sbjct: 307 SETEKMVQAYPRILYISCNPETLCQNLETLSETHEIARLALFDQFPYTHHMECGVLLTKK 366