Pairwise Alignments

Query, 369 a.a., tRNA (uridine(54)-C5)-methyltransferase TrmA from Vibrio cholerae E7946 ATCC 55056

Subject, 366 a.a., tRNA/tmRNA (uracil-C(5))-methyltransferase from Enterobacter sp. TBS_079

 Score =  485 bits (1248), Expect = e-142
 Identities = 233/360 (64%), Positives = 294/360 (81%), Gaps = 2/360 (0%)

Query: 9   ELYQAQLADKIARLKAMFVDYSMPELEVFESPVANYRMRAEFRIWHEGDDMYYIMFNQET 68
           E Y AQLA+K+ RL++M   ++ P  EVF SPV++YRMRAEFRIWH+GDD+Y+I+F+Q+T
Sbjct: 9   EQYDAQLAEKVVRLQSMMTPFNAPVPEVFRSPVSHYRMRAEFRIWHDGDDLYHIIFDQQT 68

Query: 69  REKYRVDQFPAASRLINDLMPLLMDAMKGSPILRHKLFQVDFLSTLSGEILVSLLYHRQL 128
           + + RVD FPAAS LIN LM L++D ++ +P+LRHKLFQ+D+L+T S + +VSLLYH+ L
Sbjct: 69  KSRIRVDSFPAASELINQLMTLMIDGVRNNPVLRHKLFQIDYLTTQSNQAIVSLLYHKAL 128

Query: 129 SEEWITAAQALKQRLNDEGFNLNLIGRARKMKVVLDRDYVVENLQVNGQPYVYKQVENSF 188
           ++EW   A+AL+  L  +  N++LIGRA K K++LD+D++ E L V G+  VY+QVENSF
Sbjct: 129 NDEWREQAEALRDALRAQNINVHLIGRATKTKIMLDQDFIDERLSVAGKEMVYRQVENSF 188

Query: 189 TQPNAKVAEKMLEWAVDCTQESKGDLLELYCGNGNFSLALAQNFERVLATELAKPSVEAA 248
           TQPNA +  +ML+WA+  T+ SKGDLLELYCGNGNFSLALA+NFERVLATE+AKPSV AA
Sbjct: 189 TQPNAAMNVQMLDWALKATEGSKGDLLELYCGNGNFSLALARNFERVLATEIAKPSVAAA 248

Query: 249 QFNIAANQIGNVQIIRMSAEEFTQAMEGKREFNRLKDAGVDLQSYRCNTIFVDPPRSGMD 308
           Q+NIAAN I NVQIIRMSAEEFTQAM G R+FNRL+  G+DL+SY+C TIFVDPPRSG+D
Sbjct: 249 QYNIAANHIDNVQIIRMSAEEFTQAMNGVRQFNRLE--GIDLKSYQCETIFVDPPRSGLD 306

Query: 309 IDTCKMVQGYERILYISCNPETLQENLQVLGETHQVVRFALFDQFPYTHHMEAGVMLERK 368
            +T KMVQ Y RILYISCNPETL +NL+ L +TH V R ALFDQFPYTHHME GV+L  K
Sbjct: 307 SETEKMVQAYPRILYISCNPETLCKNLETLSQTHNVERLALFDQFPYTHHMECGVLLTAK 366