Pairwise Alignments

Query, 369 a.a., tRNA (uridine(54)-C5)-methyltransferase TrmA from Vibrio cholerae E7946 ATCC 55056

Subject, 375 a.a., 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC from Enterobacter sp. TBS_079

 Score = 54.7 bits (130), Expect = 4e-12
 Identities = 43/182 (23%), Positives = 78/182 (42%), Gaps = 21/182 (11%)

Query: 187 SFTQPNAKVAEKMLEWAVDCTQESK-GDLLELYCGNGNFSLALAQNFERVLATELAKPSV 245
           SF Q N  VA  +   A D  +      + +L+CG G F L  A    ++   E++  ++
Sbjct: 209 SFFQTNPTVASALYATARDWVRALNIHHMWDLFCGVGGFGLHCATPDMQLTGIEISAEAI 268

Query: 246 EAAQFNIAANQIGNVQIIRMSAEEFTQAMEGKREFNRLKDAGVDLQSYRCNTIFVDPPRS 305
             A+ + A   +  +    + + +F    +   E                  + V+PPR 
Sbjct: 269 ACARQSAAELGLTRLHFQALDSTQFATGQDNVPEL-----------------VLVNPPRR 311

Query: 306 GMDIDTCKMVQGY--ERILYISCNPETLQENLQVLGETHQVVRFALFDQFPYTHHMEAGV 363
           G+    C  +     + I+Y SCN +T+ +++  L   +++ R  LFD FP+T H E   
Sbjct: 312 GIGKALCDYLSQMAPDYIVYSSCNAQTMAKDIATL-PGYRIERVQLFDMFPHTAHYEVLT 370

Query: 364 ML 365
           +L
Sbjct: 371 LL 372