Pairwise Alignments

Query, 369 a.a., tRNA (uridine(54)-C5)-methyltransferase TrmA from Vibrio cholerae E7946 ATCC 55056

Subject, 454 a.a., RNA methyltransferase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 75.1 bits (183), Expect = 4e-18
 Identities = 55/189 (29%), Positives = 91/189 (48%), Gaps = 16/189 (8%)

Query: 181 YKQVENSFTQPNAKVAEKMLEWAVDCTQESKGDLL-ELYCGNGNFSLALAQNFERVLATE 239
           +K    SF Q N++ A  + + A +    +  +L+ +LY G G  +  +++   +V+  E
Sbjct: 277 FKVGPKSFYQTNSEQAYNLYKIAREFAGLTGKELVYDLYTGTGTIANFVSRQARQVIGIE 336

Query: 240 LAKPSVEAAQFNIAANQIGNVQIIRMSAEEFTQAMEGKREFNRLKDAGVDLQSYRCNTIF 299
               ++E A+ N   N+I N        ++        +EF          Q  R + I 
Sbjct: 337 YVPEAIEDAKVNAEINEIKNALFYAGDMKDMLT-----QEFIN--------QHGRPDVII 383

Query: 300 VDPPRSGMDIDTCKMVQGYE--RILYISCNPETLQENLQVLGETHQVVRFALFDQFPYTH 357
            DPPR+GM  D   ++   E  RI+Y+SCNP T   +LQ+L   ++V      D FP+TH
Sbjct: 384 TDPPRAGMHQDVVDVILFAEPKRIVYVSCNPATQARDLQLLDGKYKVKAVQPVDMFPHTH 443

Query: 358 HMEAGVMLE 366
           H+E  V+LE
Sbjct: 444 HVENVVLLE 452