Pairwise Alignments

Query, 369 a.a., tRNA (uridine(54)-C5)-methyltransferase TrmA from Vibrio cholerae E7946 ATCC 55056

Subject, 384 a.a., 23S rRNA methyluridine methyltransferase (RefSeq) from Shewanella sp. ANA-3

 Score = 65.9 bits (159), Expect = 2e-15
 Identities = 51/187 (27%), Positives = 85/187 (45%), Gaps = 29/187 (15%)

Query: 187 SFTQPNAKVAEKML----EWAVDCTQESKGDLLELYCGNGNFSLALAQNFERVLATELAK 242
           SF Q N +VA K+     EW  D    S   L +L+CG G F L  A     +   E+  
Sbjct: 216 SFFQTNPQVAAKLYQTAREWVADFAPAS---LWDLFCGVGGFGLHCAAKDIPLTGIEIEA 272

Query: 243 PSVEAAQFNIAANQIGNVQIIRMSAEEFT--QAMEGKREFNRLKDAGVDLQSYRCNTIFV 300
            ++  A+ +     +  V+ + + + +F   +A + K E                  I V
Sbjct: 273 EAIACAKMSAQLMGLDKVEFMALDSTDFAKGEAAQTKPEL-----------------IIV 315

Query: 301 DPPRSGMDIDTCKMVQGY--ERILYISCNPETLQENLQVLGETHQVVRFALFDQFPYTHH 358
           +PPR G+    C  +  +  + ILY SCNP+TL ++L  +   +++ +  LFD FP++ H
Sbjct: 316 NPPRRGIGESLCHSLSEFAPKAILYSSCNPKTLAKDLGHI-RGYRLTKVQLFDLFPHSDH 374

Query: 359 MEAGVML 365
            E   +L
Sbjct: 375 FEVLALL 381