Pairwise Alignments

Query, 213 a.a., HTH-type transcriptional repressor FabR from Vibrio cholerae E7946 ATCC 55056

Subject, 210 a.a., Unsaturated fatty acid biosythesis repressor FabR, TetR family from Pseudomonas fluorescens FW300-N2E2

 Score =  107 bits (268), Expect = 1e-28
 Identities = 70/204 (34%), Positives = 106/204 (51%), Gaps = 16/204 (7%)

Query: 7   RAQQKEKTRRSLIDAAFSQLSADRSFSNLSLREVAREAGIAPTSFYRHFKDMDELGLTMV 66
           RA+QK++TR +L+DAA   +   R F +LSLREVAR AGI PT FYRHF DMD+LGL +V
Sbjct: 4   RAEQKQQTRIALMDAARRLMECGRGFGSLSLREVARTAGIVPTGFYRHFDDMDQLGLVLV 63

Query: 67  DEGGLLLRQLMRQARQRIVKEGSVIRTSVETFMEFIESSPNVFRLLLRERSGTSCEFRAA 126
            E G   R+ +R  R      G +I  SV  F++ ++++ + F  L RE+ G S   R A
Sbjct: 64  SEVGQTFRETIRLVRHNEFVMGGIIDASVRIFLDVVQANRSQFLFLAREQYGGSLPVRQA 123

Query: 127 VVREIQHFAAELTE-----------YLVATGMTREEAMTQAEASVTLVFSSGAEALDLDR 175
           + +  +  +++L              L A G+  +  +    A++  +    A+AL    
Sbjct: 124 IAQLREDISSDLAADLALMPKLQHLDLAALGVMADLIVKSVFATLPDIIDPPAQALP--- 180

Query: 176 RERDELAERLIMQLRMLAKG-AHW 198
            E      ++  QLR +  G  HW
Sbjct: 181 -EHLTPQAKITQQLRFIFIGLKHW 203