Pairwise Alignments

Query, 213 a.a., HTH-type transcriptional repressor FabR from Vibrio cholerae E7946 ATCC 55056

Subject, 204 a.a., DNA-binding transcriptional repressor FabR (RefSeq) from Shewanella amazonensis SB2B

 Score =  256 bits (655), Expect = 2e-73
 Identities = 133/200 (66%), Positives = 164/200 (82%), Gaps = 1/200 (0%)

Query: 4   LGIRAQQKEKTRRSLIDAAFSQLSADRSFSNLSLREVAREAGIAPTSFYRHFKDMDELGL 63
           +G+RAQQKEKTRR+L+DAAF+QLSA+RSFS+LSLREVAREA IAPTSFYRHFKDM+ELGL
Sbjct: 1   MGVRAQQKEKTRRALVDAAFNQLSAERSFSSLSLREVAREASIAPTSFYRHFKDMNELGL 60

Query: 64  TMVDEGGLLLRQLMRQARQRIVKEGSVIRTSVETFMEFIESSPNVFRLLLRERSGTSCEF 123
           TMVDEGGL LRQ+MR+ RQR    GSVIR SV+TFME ++S+PNVFR+LL ERSGTS  F
Sbjct: 61  TMVDEGGLALRQMMRKGRQRAEAGGSVIRISVDTFMEVLDSNPNVFRILLHERSGTSAPF 120

Query: 124 RAAVVREIQHFAAELTEYLVATGMTREE-AMTQAEASVTLVFSSGAEALDLDRRERDELA 182
           RAAV REI+HF +EL  Y         E A  QAE+ VTLVF++GA ALD+ + ER  LA
Sbjct: 121 RAAVAREIEHFISELAHYTEEKAKRSPELARAQAESMVTLVFNAGAAALDMKKSERKILA 180

Query: 183 ERLIMQLRMLAKGAHWYRKE 202
           ++L++QLRM+AKGA + +++
Sbjct: 181 DQLVLQLRMVAKGAEFLQQK 200